RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 MYO16Q9Y6X6 1858 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 NOTCH4Q99466 2003 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 PI4K2BG5E9Z4 385 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 SOX1O00570 391 aaPredicted RBP10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 TGM5O43548 720 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 EPCAMP16422 314 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 TAS2R40P59535 323 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 BST2Q10589 180 aaKnown RBP10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 STXBP5Q5T5C0 1151 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 OLFML1Q6UWY5 402 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 B4GALNT4Q76KP1 1039 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 TPCN2Q8NHX9 752 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 COG1Q8WTW3 980 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 TMEM175Q9BSA9 504 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 GPATCH2LQ9NWQ4 482 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 TCRBV5S1A1TA0A578 114 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 EFCAB8A8MWE9 144 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 MSI1O43347 362 aaKnown RBP10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 MED7O43513 233 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 KRT86O43790 486 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 URODP06132 367 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 FYNP06241 537 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 TMEM253P0C7T8 217 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 COMTP21964 271 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 BCAT1P54687 386 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 BHLHA9Q7RTU4 235 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 SP7Q8TDD2 431 aaPredicted RBP10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 ALG3Q92685 438 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZBP1Q9H171 429 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 ANLNQ9NQW6 1124 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 SFMBT1Q9UHJ3 866 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 SNX10Q9Y5X0 201 aa10.01□□□□□ -0.81
HMGCLL1-206ENST00000428842 EFCAB14O75071 495 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 MAP3K6O95382 1288 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 KRT3P12035 628 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 GZMAP12544 262 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 TYMPP19971 482 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 CLCN6P51797 869 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 NTHL1P78549 312 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 DSG1Q02413 1049 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 ARHGAP17Q68EM7 881 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 DNAJC24Q6P3W2 148 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 DCUN1D2Q6PH85 259 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 DDX53Q86TM3 631 aaKnown RBP10□□□□□ -0.81
HMGCLL1-206ENST00000428842 PHF13Q86YI8 300 aaPredicted RBP10□□□□□ -0.81
HMGCLL1-206ENST00000428842 LRRC57Q8N9N7 239 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 SLC7A14Q8TBB6 771 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZBTB9Q96C00 473 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 CYP2S1Q96SQ9 504 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 HERPUD2Q9BSE4 406 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 MRPL17Q9NRX2 175 aaKnown RBP10□□□□□ -0.81
HMGCLL1-206ENST00000428842 MTRRQ9UBK8 725 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 ALG6Q9Y672 507 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 GREB1Q4ZG55 1949 aa10□□□□□ -0.81
HMGCLL1-206ENST00000428842 C2orf71A6NGG8 1288 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 I6L893 689 aaPredicted RBP9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 SYN3O14994 580 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 URI1O94763 535 aaPredicted RBP9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 SP100P23497 879 aaPredicted RBP9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 IL1R2P27930 398 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 PLCB3Q01970 1234 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 NME3Q13232 169 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 DCAF6Q58WW2 860 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 DCAF12L1Q5VU92 463 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 EP400NLQ6ZTU2 488 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 ANKS3Q6ZW76 656 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 Q7L0L9 218 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZNF677Q86XU0 584 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 HS6ST3Q8IZP7 471 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 PIK3R5Q8WYR1 880 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 RFFLQ8WZ73 363 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 SMARCD1Q96GM5 515 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 TSPAN18Q96SJ8 248 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 TLR10Q9BXR5 811 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 SLC4A5Q9BY07 1137 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 SMG9Q9H0W8 520 aaKnown RBP9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 LHX5Q9H2C1 402 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZWILCHQ9H900 591 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 SLC28A3Q9HAS3 691 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 LRRC4Q9HBW1 653 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 RNF216Q9NWF9 866 aaPredicted RBP9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 CEP83Q9Y592 693 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 TNFRSF10BO14763 440 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 CCL16O15467 120 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 LINC01565O15544 149 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 PJA2O43164 708 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZRANB2O95218 330 aaKnown RBP eCLIP9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 CYP1A2P05177 515 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 HMBSP08397 361 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 CD48P09326 243 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 KLRC2P26717 231 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 CASQ1P31415 396 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 CDH5P33151 784 aaPredicted RBP9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 KRT17Q04695 432 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 ADCY2Q08462 1091 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 GPR17Q13304 367 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 GPM6BQ13491 265 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 PPP1R15BQ5SWA1 713 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 SCYL2Q6P3W7 929 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 TDHQ8IZJ6 230 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms