RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 MAGEB5Q9BZ81 275 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 FAM129AQ9BZQ8 928 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 CHST12Q9NRB3 414 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 I3L4J1 428 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 SHOX2O60902 331 aaPredicted RBP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 MAP3K6O95382 1288 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 ITGAVP06756 1048 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 PTPN1P18031 435 aaKnown RBP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 HNRNPH2P55795 449 aaKnown RBP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 HDAC4P56524 1084 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 SKOR1P84550 965 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 CAV1Q03135 178 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 MGAT3Q09327 533 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 KRT81Q14533 505 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 TAZQ16635 292 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 CA9Q16790 459 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 LONRF1Q17RB8 773 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 PPP6R3Q5H9R7 873 aaPredicted RBP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 KIAA0319Q5VV43 1072 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 CCSAPQ6IQ19 270 aaPredicted RBP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 HIBCHQ6NVY1 386 aaPredicted RBP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 FOXR1Q6PIV2 292 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 TRMT10CQ7L0Y3 403 aaKnown RBP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 ZC3H18Q86VM9 953 aaKnown RBP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 HOOK3Q86VS8 718 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 HACE1Q8IYU2 909 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 TOP6BLQ8N6T0 577 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 SPATA18Q8TC71 538 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 RSAD2Q8WXG1 361 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 C9orf72Q96LT7 481 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 RBM15Q96T37 977 aaKnown RBP eCLIP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 RSAD1Q9HA92 442 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 SLC38A7Q9NVC3 462 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 DDX43Q9NXZ2 648 aaKnown RBP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 GOLGA8MH3BSY2 632 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 TTC4O95801 387 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 RBP3P10745 1247 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 WARSP23381 471 aaKnown RBP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 NDUFV1P49821 464 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 EIF3EP60228 445 aaKnown RBP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 IFI35P80217 286 aaPredicted RBP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 ITGA7Q13683 1181 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 DPYSL3Q14195 570 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 BOLA3Q53S33 107 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 MDH1BQ5I0G3 518 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 C1orf228Q6PIY5 440 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 UNC45BQ8IWX7 931 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 FAM71DQ8N9W8 422 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 TTC13Q8NBP0 860 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 BBOF1Q8ND07 529 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 FAM149B1Q96BN6 582 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 HHIPL1Q96JK4 782 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 MED10Q9BTT4 135 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 TSPYL1Q9H0U9 437 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 TPX2Q9ULW0 747 aaKnown RBP10.88□□□□□ -0.67
HDAC9-210ENST00000428307 INPP5FQ9Y2H2 1132 aa10.88□□□□□ -0.67
HDAC9-210ENST00000428307 APOC4-APOC2K7ER74 178 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 DNALI1O14645 258 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-210ENST00000428307 RASGRF2O14827 1237 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 RGS16O15492 202 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-210ENST00000428307 APOC2P02655 101 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 IL4RP24394 825 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 ADIGQ0VDE8 80 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 MTM1Q13496 603 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 AGBL2Q5U5Z8 902 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 DSTYKQ6XUX3 929 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 PAQR9Q6ZVX9 377 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 SLC26A9Q7LBE3 791 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 ZDHHC17Q8IUH5 632 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 MAP7D3Q8IWC1 876 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 CD99L2Q8TCZ2 262 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 CCHCR1Q8TD31 782 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-210ENST00000428307 LRRN4Q8WUT4 740 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 P3H4Q92791 437 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 CAPNS2Q96L46 248 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 HNRNPABQ99729 332 aaKnown RBP10.87□□□□□ -0.67
HDAC9-210ENST00000428307 ADAM2Q99965 735 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 SNRNP25Q9BV90 132 aaKnown RBP10.87□□□□□ -0.67
HDAC9-210ENST00000428307 DUSP16Q9BY84 665 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 ZMYND15Q9H091 742 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 HEY1Q9Y5J3 304 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 SYNJ2BP-COX16A0A087WUM0 186 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 MYBPHLA2RUH7 354 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 DPYSL4O14531 572 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 GABRDO14764 452 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 B3GAT3O94766 335 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 ENDOD1O94919 500 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 KCNA4P22459 653 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 MAP3K7CLP57077 242 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 SLC8A3P57103 927 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 NKX3-2P78367 333 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 LPIN1Q14693 890 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 DEFB115Q30KQ5 88 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 PCSK9Q8NBP7 692 aaKnown RBP10.87□□□□□ -0.67
HDAC9-210ENST00000428307 HASPINQ8TF76 798 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 HSFY1Q96LI6 401 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 RNF157Q96PX1 679 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 DNAI2Q9GZS0 605 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 NINJ2Q9NZG7 142 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms