RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CDHR3Q6ZTQ4 885 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 C15orf52Q6ZUT6 534 aaKnown RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 NUP85Q9BW27 656 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 TCRBV5S1A1TA0A578 114 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 SPAG7O75391 227 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 EIF4BP23588 611 aaKnown RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 FAXCQ5TGI0 409 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 MAMDC4Q6UXC1 1216 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 RAPH1Q70E73 1250 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 FAM178BQ8IXR5 827 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 ZNF444Q8N0Y2 327 aaPredicted RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 ICA1LQ8NDH6 482 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 PPP4R1Q8TF05 950 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 CMTM5Q96DZ9 223 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 ZNF641Q96N77 438 aaPredicted RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 MRPL1Q9BYD6 325 aaKnown RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 DEFB129Q9H1M3 183 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 CPVLQ9H3G5 476 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 MRM3Q9HC36 420 aaKnown RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 THAP1Q9NVV9 213 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 RRN3Q9NYV6 651 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 STRIP2Q9ULQ0 834 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 CHMP2BQ9UQN3 213 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 SNX9Q9Y5X1 595 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 PRR5-ARHGAP8B1AHC4 643 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 TBC1D12O60347 775 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 RBP3P10745 1247 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 ARHGAP8P85298 464 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 GRSF1Q12849 480 aaKnown RBP eCLIP5.35□□□□□ -1.55
RIF1-203ENST00000428287 MAMLD1Q13495 774 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 PIGGQ5H8A4 983 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 ANGEL2Q5VTE6 544 aaKnown RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 GRAMD4Q6IC98 578 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 SLC47A2Q86VL8 602 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 NIPA2Q8N8Q9 360 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 EYA3Q99504 573 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 CROTQ9UKG9 612 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 FRMD4BQ9Y2L6 1034 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 NUB1Q9Y5A7 615 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 TET1Q8NFU7 2136 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 LIASO43766 372 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 RSL1D1O76021 490 aaKnown RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 CYP2C9P11712 490 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 ADCY8P40145 1251 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 ARL4CP56559 192 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 AP3B2Q13367 1082 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 SPTY2D1Q68D10 685 aaPredicted RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 PAOXQ6QHF9 649 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 POTEAQ6S8J7 498 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 PCGF5Q86SE9 256 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 TPH2Q8IWU9 490 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 ERMNQ8TAM6 284 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 HM13Q8TCT9 377 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 FNIP1Q8TF40 1166 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 HSPH1Q92598 858 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 LRRC39Q96DD0 335 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 APOPT1Q96IL0 206 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 FHDC1Q9C0D6 1143 aaPredicted RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 PLAC1Q9HBJ0 212 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 DNPEPQ9ULA0 475 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 RNF11Q9Y3C5 154 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 A0A0G2JND7 137 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 RFPL1O75677 317 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 KLHL2O95198 593 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 EIF2S1P05198 315 aaKnown RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 L1CAMP32004 1257 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 MRPS5P82675 430 aaKnown RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 FOLH1Q04609 750 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 ALCAMQ13740 583 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 ZNF423Q2M1K9 1284 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 CARM1Q86X55 608 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 EFHD2Q96C19 240 aaPredicted RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 SF3B1O75533 1304 aaKnown RBP eCLIP5.35□□□□□ -1.554e-6■■■■■ 37.3
RIF1-203ENST00000428287 LOC285556D6RIA3 1793 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 GSTTP1A0A1W2PQM5 241 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 CAPN8A6NHC0 703 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 GPR25O00155 361 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 PABPC1P11940 636 aaKnown RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 PMLP29590 882 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 GALK1P51570 392 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 ADCY7P51828 1080 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 RHBDL3P58872 404 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 HIC1Q14526 733 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 AGMOQ6ZNB7 445 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 OTOP1Q7RTM1 612 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 ARID3BQ8IVW6 561 aaPredicted RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 PYROXD1Q8WU10 500 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 PRPF18Q99633 342 aaKnown RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 MRPS26Q9BYN8 205 aaKnown RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 ANO3Q9BYT9 981 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 UBA5Q9GZZ9 404 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 JMJD4Q9H9V9 463 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 PLGRKTQ9HBL7 147 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 TBC1D7Q9P0N9 293 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 SLC17A7Q9P2U7 560 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 TAGLN3Q9UI15 199 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 SLC30A1Q9Y6M5 507 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 SDK2Q58EX2 2172 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 TCRBV9S1A1TA0A576 114 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms