RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 SPATA18Q8TC71 538 aa18.06■□□□□ 0.48
PRDM5-203ENST00000428209 PPANQ9NQ55 473 aaKnown RBP18.06■□□□□ 0.48
PRDM5-203ENST00000428209 NDC80O14777 642 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 MCF2LO15068 1137 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 WARSP23381 471 aaKnown RBP18.05■□□□□ 0.48
PRDM5-203ENST00000428209 CCT5P48643 541 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 PRKCZQ05513 592 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 TFDP2Q14188 446 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 RNASEH2BQ5TBB1 312 aaKnown RBP18.05■□□□□ 0.48
PRDM5-203ENST00000428209 MFSD5Q6N075 450 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 SERINC5Q86VE9 423 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 OSTM1Q86WC4 334 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 HACE1Q8IYU2 909 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.05■□□□□ 0.48
PRDM5-203ENST00000428209 TSPYL2Q9H2G4 693 aaPredicted RBP18.05■□□□□ 0.48
PRDM5-203ENST00000428209 SAYSD1Q9NPB0 183 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 RBP3P10745 1247 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 MLH1P40692 756 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 ACADSBP45954 432 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 SEC24CP53992 1094 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 CACNB2Q08289 660 aaPredicted RBP18.05■□□□□ 0.48
PRDM5-203ENST00000428209 PDK2Q15119 407 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 NPNTQ6UXI9 565 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 SLC26A9Q7LBE3 791 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 MDM1Q8TC05 714 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 P3H4Q92791 437 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 SERPINB12Q96P63 405 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 GAD1Q99259 594 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 NCAPGQ9BPX3 1015 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 SENP6Q9GZR1 1112 aaPredicted RBP18.05■□□□□ 0.48
PRDM5-203ENST00000428209 XPNPEP3Q9NQH7 507 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 CHST12Q9NRB3 414 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 SLC38A7Q9NVC3 462 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 GPATCH2LQ9NWQ4 482 aa18.05■□□□□ 0.48
PRDM5-203ENST00000428209 E7EVH7 732 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 ATP2C2O75185 946 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 ZC3H12AQ5D1E8 599 aaKnown RBP18.04■□□□□ 0.48
PRDM5-203ENST00000428209 WSCD1Q658N2 575 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 PCGF5Q86SE9 256 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 UNC45BQ8IWX7 931 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 SMC1BQ8NDV3 1235 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 TEKT4Q8WW24 435 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 LPPQ93052 612 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 HSFY1Q96LI6 401 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 RNF157Q96PX1 679 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 TBCBQ99426 244 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 SELENOSQ9BQE4 189 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 CYLDQ9NQC7 956 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 CACNG4Q9UBN1 327 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 THP07101 528 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 ASGR1P07306 291 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 IGFBP6P24592 240 aaPredicted RBP18.04■□□□□ 0.48
PRDM5-203ENST00000428209 ACAT1P24752 427 aaKnown RBP18.04■□□□□ 0.48
PRDM5-203ENST00000428209 TKTP29401 623 aaKnown RBP18.04■□□□□ 0.48
PRDM5-203ENST00000428209 MMP13P45452 471 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 RPL34P49207 117 aaKnown RBP18.04■□□□□ 0.48
PRDM5-203ENST00000428209 CTCFP49711 727 aaPredicted RBP18.04■□□□□ 0.48
PRDM5-203ENST00000428209 HDAC4P56524 1084 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 TNFAIP8L3Q5GJ75 292 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 CYP4F22Q6NT55 531 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 GSTCDQ8NEC7 633 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 SNRNP25Q9BV90 132 aaKnown RBP18.04■□□□□ 0.48
PRDM5-203ENST00000428209 SHOC2Q9UQ13 582 aa18.04■□□□□ 0.48
PRDM5-203ENST00000428209 GPR182O15218 404 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 ADAMTS4O75173 837 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 TFE3P19532 575 aaPredicted RBP18.03■□□□□ 0.48
PRDM5-203ENST00000428209 RPL22P35268 128 aaKnown RBP18.03■□□□□ 0.48
PRDM5-203ENST00000428209 AFF1P51825 1210 aaKnown RBP18.03■□□□□ 0.48
PRDM5-203ENST00000428209 SLC8A3P57103 927 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 TAOK1Q7L7X3 1001 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 ZC3H18Q86VM9 953 aaKnown RBP18.03■□□□□ 0.48
PRDM5-203ENST00000428209 FAM71DQ8N9W8 422 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 HNRNPABQ99729 332 aaKnown RBP18.03■□□□□ 0.48
PRDM5-203ENST00000428209 CCDC77Q9BR77 488 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 SRRM3A6NNA2 597 aaPredicted RBP18.03■□□□□ 0.48
PRDM5-203ENST00000428209 XPO1O14980 1071 aaKnown RBP18.03■□□□□ 0.48
PRDM5-203ENST00000428209 PTPN1P18031 435 aaKnown RBP18.03■□□□□ 0.48
PRDM5-203ENST00000428209 IL4RP24394 825 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 YY1P25490 414 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 RDXP35241 583 aaKnown RBP18.03■□□□□ 0.48
PRDM5-203ENST00000428209 SCNN1AP37088 669 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 THPOP40225 353 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 PTPN9P43378 593 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 NOMO1Q15155 1222 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 KCNA10Q16322 511 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 CCDC142Q17RM4 750 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 CCDC38Q502W7 563 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 DARS2Q6PI48 645 aaKnown RBP18.03■□□□□ 0.48
PRDM5-203ENST00000428209 C1orf228Q6PIY5 440 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 NLRP14Q86W24 1093 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 FUKQ8N0W3 1084 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 PRCCQ92733 491 aaPredicted RBP18.03■□□□□ 0.48
PRDM5-203ENST00000428209 DUSP16Q9BY84 665 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 AGO3Q9H9G7 860 aaKnown RBP18.03■□□□□ 0.48
PRDM5-203ENST00000428209 PCDH18Q9HCL0 1135 aa18.03■□□□□ 0.48
PRDM5-203ENST00000428209 GOLGA8MH3BSY2 632 aa18.02■□□□□ 0.48
PRDM5-203ENST00000428209 CLDN5O00501 218 aa18.02■□□□□ 0.48
PRDM5-203ENST00000428209 MDM4O15151 490 aa18.02■□□□□ 0.48
PRDM5-203ENST00000428209 TOMM70O94826 608 aa18.02■□□□□ 0.48
PRDM5-203ENST00000428209 ROR1Q01973 937 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms