RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 HOXA6P31267 233 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 CNR2P34972 360 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 GALK1P51570 392 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 MAP3K7CLP57077 242 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 ORC1Q13415 861 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 TCERG1LQ5VWI1 586 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 FSTL4Q6MZW2 842 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 ZC3H3Q8IXZ2 948 aaKnown RBP16.05■□□□□ 0.16
PHF1-204ENST00000427826 CD101Q93033 1021 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 LINC00597Q9H2U6 94 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 PNPLA8Q9NP80 782 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 FAM49BQ9NUQ9 324 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 TBC1D14Q9P2M4 693 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 HMGXB4Q9UGU5 601 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 ARMCX3Q9UH62 379 aaPredicted RBP16.05■□□□□ 0.16
PHF1-204ENST00000427826 RAB23Q9ULC3 237 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 PTPRDP23468 1912 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 OBSL1O75147 1896 aa16.05■□□□□ 0.16
PHF1-204ENST00000427826 E2F8A0AVK6 867 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 ZDHHC11BP0C7U3 371 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 CD58P19256 250 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 ADORA2BP29275 332 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 ANP32AP39687 249 aaKnown RBP16.04■□□□□ 0.16
PHF1-204ENST00000427826 ZXDBP98169 803 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 DCAF17Q5H9S7 520 aaPredicted RBP16.04■□□□□ 0.16
PHF1-204ENST00000427826 LONP2Q86WA8 852 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 ZMIZ2Q8NF64 920 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 ERCC4Q92889 916 aaPredicted RBP16.04■□□□□ 0.16
PHF1-204ENST00000427826 CHFRQ96EP1 664 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 NACA2Q9H009 215 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 METTL14Q9HCE5 456 aaKnown RBP16.04■□□□□ 0.16
PHF1-204ENST00000427826 RTN4Q9NQC3 1192 aaKnown RBP16.04■□□□□ 0.16
PHF1-204ENST00000427826 TLR8Q9NR97 1041 aaKnown RBP16.04■□□□□ 0.16
PHF1-204ENST00000427826 SMPD4Q9NXE4 827 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 CFAP97Q9P2B7 532 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 NCDNQ9UBB6 729 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 SMG5Q9UPR3 1016 aaKnown RBP16.04■□□□□ 0.16
PHF1-204ENST00000427826 CFAP54Q96N23 3096 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 ZNF638Q14966 1978 aaKnown RBP16.04■□□□□ 0.16
PHF1-204ENST00000427826 GREB1Q4ZG55 1949 aa16.04■□□□□ 0.16
PHF1-204ENST00000427826 KIF26AQ9ULI4 1882 aaPredicted RBP16.03■□□□□ 0.16
PHF1-204ENST00000427826 CHURC1-FNTBB4DL54 471 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 K7ESF4 209 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 COCHO43405 550 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 BEST1O76090 585 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 EGFP01133 1207 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 FILIP1Q7Z7B0 1213 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 ADGRG2Q8IZP9 1017 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 GPR161Q8N6U8 529 aaKnown RBP16.03■□□□□ 0.16
PHF1-204ENST00000427826 WHAMMQ8TF30 809 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 SEMA4DQ92854 862 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 OTUB2Q96DC9 234 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 HEXIM2Q96MH2 286 aaKnown RBP16.03■□□□□ 0.16
PHF1-204ENST00000427826 CEP63Q96MT8 703 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 TWNKQ96RR1 684 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 CISHQ9NSE2 258 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 GMIPQ9P107 970 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 SLC8A2Q9UPR5 921 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 SCML2Q9UQR0 700 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 COQ4Q9Y3A0 265 aa16.03■□□□□ 0.16
PHF1-204ENST00000427826 FANCMQ8IYD8 2048 aa16.02■□□□□ 0.16
PHF1-204ENST00000427826 EP300Q09472 2414 aaPredicted RBP16.02■□□□□ 0.16
PHF1-204ENST00000427826 GVINP1Q7Z2Y8 2422 aa16.02■□□□□ 0.16
PHF1-204ENST00000427826 RNF40O75150 1001 aa16.02■□□□□ 0.16
PHF1-204ENST00000427826 ADH1CP00326 375 aa16.02■□□□□ 0.16
PHF1-204ENST00000427826 FNTBP49356 437 aa16.02■□□□□ 0.16
PHF1-204ENST00000427826 PMS1P54277 932 aaKnown RBP16.02■□□□□ 0.16
PHF1-204ENST00000427826 FOXR2Q6PJQ5 311 aa16.02■□□□□ 0.16
PHF1-204ENST00000427826 CLEC20AQ6ZU45 233 aa16.02■□□□□ 0.16
PHF1-204ENST00000427826 TMEM176AQ96HP8 235 aa16.02■□□□□ 0.16
PHF1-204ENST00000427826 DUSP9Q99956 384 aaKnown RBP16.02■□□□□ 0.16
PHF1-204ENST00000427826 DUSP16Q9BY84 665 aa16.02■□□□□ 0.16
PHF1-204ENST00000427826 FBRSL1Q9HCM7 1045 aaKnown RBP16.02■□□□□ 0.16
PHF1-204ENST00000427826 MAN1B1Q9UKM7 699 aa16.02■□□□□ 0.16
PHF1-204ENST00000427826 SH3BP1Q9Y3L3 701 aa16.02■□□□□ 0.16
PHF1-204ENST00000427826 ANAPC1Q9H1A4 1944 aa16.02■□□□□ 0.15
PHF1-204ENST00000427826 CCDC163A0A0D9SF12 145 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 BICDL2A1A5D9 508 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 TLR5O60602 858 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 ACO1P21399 889 aaKnown RBP16.01■□□□□ 0.15
PHF1-204ENST00000427826 PSEN1P49768 467 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 SLC8A3P57103 927 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 YWHAEP62258 255 aaKnown RBP16.01■□□□□ 0.15
PHF1-204ENST00000427826 GOLGA8FQ08AF8 430 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 GOLGA8DPQ0D2H9 430 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 DHCR24Q15392 516 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 CBWD6Q4V339 395 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 CBWD3Q5JTY5 395 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 CBWD5Q5RIA9 395 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 TADA2BQ86TJ2 420 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 CAMKK1Q8N5S9 505 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 ACDQ96AP0 544 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 UBXN6Q9BZV1 441 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 CCSER2Q9H7U1 834 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 GMEB2Q9UKD1 530 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 WDR87Q6ZQQ6 2873 aa16.01■□□□□ 0.15
PHF1-204ENST00000427826 TRIM49BA6NDI0 452 aa16■□□□□ 0.15
PHF1-204ENST00000427826 HHLA1C9JL84 531 aa16■□□□□ 0.15
PHF1-204ENST00000427826 CYP17A1P05093 508 aa16■□□□□ 0.15
PHF1-204ENST00000427826 ATP5C1P36542 298 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms