RNA–Protein interactions for RNA: ENST00000427658.1

AFG3L1P-208, Transcript of AFG3 like matrix AAA peptidase subunit 1, pseudogene, human

TSL 2

Gene AFG3L1P, Length 2,758 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFG3L1P-208	ENST00000427658	CD101	Q93033	1021 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	TAMM41	Q96BW9	452 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	ISOC1	Q96CN7	298 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	DNAJC19	Q96DA6	116 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	FAM84B	Q96KN1	310 aa	Predicted RBP	10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SYT11	Q9BT88	431 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	STK17A	Q9UEE5	414 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	POMP	Q9Y244	141 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	NMT2	O60551	498 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	POLR2E	P19388	210 aa	Known RBP	10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	TNFAIP3	P21580	790 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	NR2F2	P24468	414 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SCNN1D	P51172	638 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	GPC3	P51654	580 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	ITGAD	Q13349	1161 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	UBAP2L	Q14157	1087 aa	Known RBP	10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	FASTKD3	Q14CZ7	662 aa	Known RBP	10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	TCHHL1	Q5QJ38	904 aa	Predicted RBP	10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	PGM2L1	Q6PCE3	622 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	ANKS1B	Q7Z6G8	1248 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	TTC30A	Q86WT1	665 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	RTKN2	Q8IZC4	609 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CADM3	Q8N126	398 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	PQLC1	Q8N2U9	271 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SLC39A3	Q9BRY0	314 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	WNT8A	Q9H1J5	351 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CORIN	Q9Y5Q5	1042 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	WTIP	A6NIX2	430 aa	Predicted RBP	10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	FSCN2	O14926	492 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CYTH3	O43739	400 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	PIAS1	O75925	651 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	KRT75	O95678	551 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CHRNA5	P30532	468 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SOX5	P35711	763 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	BTD	P43251	543 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	IZUMO3	Q5VZ72	239 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SIGIRR	Q6IA17	410 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CCSAP	Q6IQ19	270 aa	Predicted RBP	10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	HPS6	Q86YV9	775 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	GRAMD2A	Q8IUY3	354 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	LRRC49	Q8IUZ0	686 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	ZFPM1	Q8IX07	1006 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SPERT	Q8NA61	448 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SDR42E1	Q8WUS8	393 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	OTUD5	Q96G74	571 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	EGLN2	Q96KS0	407 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CCDC138	Q96M89	665 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	KLHL25	Q9H0H3	589 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SNX25	Q9H3E2	840 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	VPS37B	Q9H9H4	285 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SSU72	Q9NP77	194 aa	Known RBP	10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	KCNK4	Q9NYG8	393 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	GCNT4	Q9P109	453 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	HERC5	Q9UII4	1024 aa	Known RBP	10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	RABGEF1	Q9UJ41	708 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	GNPTG	Q9UJJ9	305 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	POLI	Q9UNA4	740 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	ERGIC3	Q9Y282	383 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	IFT52	Q9Y366	437 aa		10.88	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	ATE1	O95260	518 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CCDC130	P13994	396 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	NELFE	P18615	380 aa	Known RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	NR4A1	P22736	598 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	KLRK1	P26718	216 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	RPA1	P27694	616 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	BCAM	P50895	628 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	HADHB	P55084	474 aa	Known RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	TUBA4A	P68366	448 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	ADAM17	P78536	824 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	PDIA2	Q13087	525 aa	Known RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	REM2	Q8IYK8	340 aa	Predicted RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CPSF7	Q8N684	471 aa	Known RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	PDZD8	Q8NEN9	1154 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	BTBD6	Q96KE9	485 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	GGA1	Q9UJY5	639 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SQOR	Q9Y6N5	450 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CYP2D7	A0A087X1C5	515 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	TM9SF1	O15321	606 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CSDE1	O75534	798 aa	Known RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	FARP2	O94887	1054 aa	Predicted RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	FTL	P02792	175 aa	Predicted RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	XRCC5	P13010	732 aa	Known RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CD247	P20963	164 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	IFITM2	Q01629	132 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	DRAP1	Q14919	205 aa	Predicted RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CCNG2	Q16589	344 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	FXN	Q16595	210 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	TRIM16L	Q309B1	348 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SYDE1	Q6ZW31	735 aa	Predicted RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	MMAA	Q8IVH4	418 aa	Known RBP	10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	BANP	Q8N9N5	519 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	GOLM1	Q8NBJ4	401 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	TTC17	Q96AE7	1141 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	WRNIP1	Q96S55	665 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SLC2A11	Q9BYW1	496 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	ANLN	Q9NQW6	1124 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SH3GLB2	Q9NR46	395 aa		10.87	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms