RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 CWF19L1Q69YN2 538 aaKnown RBP16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 ENOSF1Q7L5Y1 443 aa16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 GPRIN1Q7Z2K8 1008 aa16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 TTC30AQ86WT1 665 aa16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 CMTM8Q8IZV2 173 aa16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 SHC3Q92529 594 aa16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 NAA15Q9BXJ9 866 aaKnown RBP16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 DNAI2Q9GZS0 605 aa16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 TRPV4Q9HBA0 871 aa16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 DMAP1Q9NPF5 467 aaPredicted RBP16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 RTN4Q9NQC3 1192 aaKnown RBP16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 RRAGDQ9NQL2 400 aaPredicted RBP16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 HEBP1Q9NRV9 189 aa16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 FAM207AQ9NSI2 230 aaPredicted RBP16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 TSPAN16Q9UKR8 245 aa16.58■□□□□ 0.24
CLK3P2-201ENST00000427566 COL4A2P08572 1712 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 GOLGA6L6A8MZA4 724 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 TULP2O00295 520 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 O00370 1275 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 TNFRSF10BO14763 440 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 PI15O43692 258 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 PAEPP09466 180 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 VDRP11473 427 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 MSNP26038 577 aaKnown RBP16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 DDX6P26196 483 aaKnown RBP eCLIP16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 CLCN1P35523 988 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 RAPGEF1Q13905 1077 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 DRAP1Q14919 205 aaPredicted RBP16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 GOLGA7BQ2TAP0 167 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 TMEM105Q8N8V8 129 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 IRF7Q92985 503 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 SHDQ96IW2 340 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 MYRFLQ96LU7 910 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 ERGIC2Q96RQ1 377 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 DUSP16Q9BY84 665 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 PLCB1Q9NQ66 1216 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 EHD2Q9NZN4 543 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 ZKSCAN5Q9Y2L8 839 aa16.57■□□□□ 0.24
CLK3P2-201ENST00000427566 A0A1B0GTH6 734 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 CKMP06732 381 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 CD72P21854 359 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 CLCN5P51795 746 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 SLC5A3P53794 718 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 FANCCQ00597 558 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 UBXN2BQ14CS0 331 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 TPRG1Q6ZUI0 275 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 MON1AQ86VX9 555 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 NUP93Q8N1F7 819 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 CELF5Q8N6W0 485 aaKnown RBP16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 TTC8Q8TAM2 541 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 UBA3Q8TBC4 463 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 BPIFB1Q8TDL5 484 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 CSGALNACT1Q8TDX6 532 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 ZFYVE19Q96K21 471 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 CYP2S1Q96SQ9 504 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 FOXQ1Q9C009 403 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 TRPM5Q9NZQ8 1165 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 ZMYM5Q9UJ78 669 aa16.56■□□□□ 0.24
CLK3P2-201ENST00000427566 TRAV19A0A0A6YYK7 116 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 C2orf78A6NCI8 922 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 CYP26A1O43174 497 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 SERPINC1P01008 464 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 AOC1P19801 751 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 CDC25BP30305 580 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 PGFP49763 221 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 POLR2FP61218 127 aaKnown RBP16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 TAF10Q12962 218 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 ARL14EPQ8N8R7 260 aaPredicted RBP16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 ANKRD52Q8NB46 1076 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 DNASE1L2Q92874 299 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 FBXO32Q969P5 355 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 CEP295NLQ96MC4 621 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 PCMTD1Q96MG8 357 aaPredicted RBP16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 SLITRK1Q96PX8 696 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 TTLL2Q9BWV7 592 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 NLRC4Q9NPP4 1024 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 CCL26Q9Y258 94 aa16.55■□□□□ 0.24
CLK3P2-201ENST00000427566 RTN3O95197 1032 aaPredicted RBP16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 DCNP07585 359 aaKnown RBP16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 USP17L7P0C7H9 530 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 YWHAQP27348 245 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 ZNF75DP51815 510 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 TPM4P67936 248 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 PRKCQQ04759 706 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 PDE4CQ08493 712 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 NR1I3Q14994 352 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 PKDCCQ504Y2 493 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 USP13Q92995 863 aaPredicted RBP16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 FAM81BQ96LP2 452 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 LRRC3BQ96PB8 259 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 TRIM5Q9C035 493 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 TDP1Q9NUW8 608 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 THG1LQ9NWX6 298 aaKnown RBP16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 IL37Q9NZH6 218 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 KIAA1257Q9ULG3 409 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 SIT1Q9Y3P8 196 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 CHADO15335 359 aa16.54■□□□□ 0.24
CLK3P2-201ENST00000427566 HDCP19113 662 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms