RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 BACH2Q9BYV9 841 aa10.85□□□□□ -0.67
HDLBP-213ENST00000427007 SDCBP2Q9H190 292 aa10.85□□□□□ -0.67
HDLBP-213ENST00000427007 MAGEF1Q9HAY2 307 aa10.85□□□□□ -0.67
HDLBP-213ENST00000427007 FAM13BQ9NYF5 915 aa10.85□□□□□ -0.67
HDLBP-213ENST00000427007 CHORDC1Q9UHD1 332 aaPredicted RBP10.85□□□□□ -0.67
HDLBP-213ENST00000427007 PCDHA7Q9UN72 937 aa10.85□□□□□ -0.67
HDLBP-213ENST00000427007 KMT2BQ9UMN6 2715 aaPredicted RBP10.85□□□□□ -0.67
HDLBP-213ENST00000427007 MYOFQ9NZM1 2061 aa10.85□□□□□ -0.67
HDLBP-213ENST00000427007 SPTBN2O15020 2390 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 SDK1Q7Z5N4 2213 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 PVALEFA0A1B0GWK0 134 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 LNP1A1A4G5 178 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 C4orf47A7E2U8 309 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 PATE3B3GLJ2 98 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 SGK1O00141 431 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 SLC9A3R1O14745 358 aaPredicted RBP10.84□□□□□ -0.67
HDLBP-213ENST00000427007 COCHO43405 550 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 RTN3O95197 1032 aaPredicted RBP10.84□□□□□ -0.67
HDLBP-213ENST00000427007 KAT7O95251 611 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 KCNK5O95279 499 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 ADH1CP00326 375 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 F13A1P00488 732 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 APODP05090 189 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 FAM163BP0C2L3 166 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 IRF1P10914 325 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 ADH5P11766 374 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 PMLP29590 882 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 ME1P48163 572 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 DHPSP49366 369 aaPredicted RBP10.84□□□□□ -0.67
HDLBP-213ENST00000427007 SLC5A3P53794 718 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 DLG4P78352 724 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 MRPS21P82921 87 aaKnown RBP10.84□□□□□ -0.67
HDLBP-213ENST00000427007 ZNF667Q5HYK9 610 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 LY6G5CQ5SRR4 150 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 PSAPL1Q6NUJ1 521 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 PAQR9Q6ZVX9 377 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 DDX42Q86XP3 938 aaKnown RBP eCLIP10.84□□□□□ -0.67
HDLBP-213ENST00000427007 C12orf56Q8IXR9 622 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 FRMD1Q8N878 549 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 NAT16Q8N8M0 369 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 IL17RCQ8NAC3 791 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 PDZD8Q8NEN9 1154 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 PARD3BQ8TEW8 1205 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 RLN3Q8WXF3 142 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 ZFRQ96KR1 1074 aaKnown RBP10.84□□□□□ -0.67
HDLBP-213ENST00000427007 LSM14BQ9BX40 385 aaKnown RBP10.84□□□□□ -0.67
HDLBP-213ENST00000427007 CCSER2Q9H7U1 834 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 ARHGEF4Q9NR80 690 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 CGNQ9P2M7 1197 aaKnown RBP10.84□□□□□ -0.67
HDLBP-213ENST00000427007 SERTAD1Q9UHV2 236 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 ANGPTL2Q9UKU9 493 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 SH3BP1Q9Y3L3 701 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 LAMA1P25391 3075 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 TNRC6BQ9UPQ9 1833 aaKnown RBP10.84□□□□□ -0.67
HDLBP-213ENST00000427007 ATP8B3O60423 1300 aa10.84□□□□□ -0.67
HDLBP-213ENST00000427007 MYH10P35580 1976 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 TNFRSF10BO14763 440 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 KLRC4O43908 158 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 AP1G2O75843 785 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 BEST1O76090 585 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 ALDH1A2O94788 518 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 VNN1O95497 513 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 C4BPAP04003 597 aaKnown RBP10.83□□□□□ -0.68
HDLBP-213ENST00000427007 ZSCAN22P10073 491 aaPredicted RBP10.83□□□□□ -0.68
HDLBP-213ENST00000427007 CCDC130P13994 396 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 EIF2DP41214 584 aaKnown RBP10.83□□□□□ -0.68
HDLBP-213ENST00000427007 STK4Q13043 487 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 NCOA4Q13772 614 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 HECTD3Q5T447 861 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 RESP18Q5W5W9 173 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 ARMCX6Q7L4S7 300 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 CYP2U1Q7Z449 544 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 ACOT1Q86TX2 421 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 C11orf74Q86VG3 221 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 BBS7Q8IWZ6 715 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 CEP57L1Q8IYX8 460 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 KIAA0895Q8NCT3 520 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 OVCA2Q8WZ82 227 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 PIGKQ92643 395 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 WBP2Q969T9 261 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 SMARCD1Q96GM5 515 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 TNIP3Q96KP6 325 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 VRTNQ9H8Y1 702 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 DMAP1Q9NPF5 467 aaPredicted RBP10.83□□□□□ -0.68
HDLBP-213ENST00000427007 KRT82Q9NSB4 513 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 GMIPQ9P107 970 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 BCCIPQ9P287 314 aaKnown RBP eCLIP10.83□□□□□ -0.68
HDLBP-213ENST00000427007 TBC1D14Q9P2M4 693 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 HMGXB4Q9UGU5 601 aa10.83□□□□□ -0.68
HDLBP-213ENST00000427007 ATXN2Q99700 1313 aaKnown RBP10.83□□□□□ -0.68
HDLBP-213ENST00000427007 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.82□□□□□ -0.68
HDLBP-213ENST00000427007 TCRBV21S2A2A0A5A6 115 aa10.82□□□□□ -0.68
HDLBP-213ENST00000427007 E2F8A0AVK6 867 aa10.82□□□□□ -0.68
HDLBP-213ENST00000427007 GIPC1O14908 333 aa10.82□□□□□ -0.68
HDLBP-213ENST00000427007 KHNYNO15037 678 aaKnown RBP10.82□□□□□ -0.68
HDLBP-213ENST00000427007 ADAM23O75077 832 aa10.82□□□□□ -0.68
HDLBP-213ENST00000427007 HSP90AA1P07900 732 aaKnown RBP10.82□□□□□ -0.68
HDLBP-213ENST00000427007 CHRM1P11229 460 aaPredicted RBP10.82□□□□□ -0.68
HDLBP-213ENST00000427007 GRIA2P42262 883 aa10.82□□□□□ -0.68
HDLBP-213ENST00000427007 KIR2DL1P43626 348 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms