RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 RNF8O76064 485 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 GRIA1P42261 906 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 ROR1Q01973 937 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 OR6B2Q6IFH4 312 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 NRG4Q8WWG1 115 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 PGLYRP2Q96PD5 576 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 SMYD2Q9NRG4 433 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 MAD1L1Q9Y6D9 718 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 RLFQ13129 1914 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 GSC2O15499 205 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 TRUB2O95900 331 aaKnown RBP14.99□□□□□ -0.01
ERCC3-202ENST00000426778 RBL1P28749 1068 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 YWHAEP62258 255 aaKnown RBP14.99□□□□□ -0.01
ERCC3-202ENST00000426778 CA9Q16790 459 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 ZNF667Q5HYK9 610 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 MROH9Q5TGP6 573 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 TRMT10BQ6PF06 316 aaKnown RBP14.99□□□□□ -0.01
ERCC3-202ENST00000426778 CATSPERGQ6ZRH7 1159 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 SLC25A41Q8N5S1 370 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 C1orf127Q8N9H9 656 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 SLC4A11Q8NBS3 891 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 CPB2Q96IY4 423 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 SRPK1Q96SB4 655 aaKnown RBP14.99□□□□□ -0.01
ERCC3-202ENST00000426778 DHRS4Q9BTZ2 278 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 IQCGQ9H095 443 aaKnown RBP14.99□□□□□ -0.01
ERCC3-202ENST00000426778 NRBP2Q9NSY0 501 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 NMRK1Q9NWW6 199 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 TAS2R1Q9NYW7 299 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 WASF2Q9Y6W5 498 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 H3BRJ5 948 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 APOC4-APOC2K7ER74 178 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 KIF1CO43896 1103 aaKnown RBP14.98□□□□□ -0.01
ERCC3-202ENST00000426778 TNNC2P02585 160 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 APOC2P02655 101 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 HMGCRP04035 888 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 AMPD1P23109 780 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 SERPINB4P48594 390 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 RASSF2P50749 326 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 ATXN1P54253 815 aaKnown RBP14.98□□□□□ -0.01
ERCC3-202ENST00000426778 TARBP2Q15633 366 aaKnown RBP14.98□□□□□ -0.01
ERCC3-202ENST00000426778 MAP1SQ66K74 1059 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-202ENST00000426778 PCGF5Q86SE9 256 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 ARID3BQ8IVW6 561 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-202ENST00000426778 MPP5Q8N3R9 675 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 NIPA2Q8N8Q9 360 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-202ENST00000426778 PPP1R13LQ8WUF5 828 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 PCMTD2Q9NV79 361 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 STK32BQ9NY57 414 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 IL1RAPL1Q9NZN1 696 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 FCHO1O14526 889 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 COPEO14579 308 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 ABLIM1O14639 778 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 CAPN9O14815 690 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 DLDP09622 509 aaKnown RBP14.98□□□□□ -0.01
ERCC3-202ENST00000426778 LINGO3P0C6S8 592 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 ESRRAP11474 423 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-202ENST00000426778 PDGFRAP16234 1089 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 POLR2BP30876 1174 aaKnown RBP14.98□□□□□ -0.01
ERCC3-202ENST00000426778 CRADDP78560 199 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 BLMHQ13867 455 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 GJC2Q5T442 439 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-202ENST00000426778 ATF7IP2Q5U623 682 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 TREML1Q86YW5 311 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 RXFP2Q8WXD0 754 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 ANKRD36BP1Q96IX9 119 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 BTBD10Q9BSF8 475 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 SHCBP1LQ9BZQ2 653 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 C20orf27Q9GZN8 174 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 BTBD7Q9P203 1132 aa14.98□□□□□ -0.01
ERCC3-202ENST00000426778 PHIPQ8WWQ0 1821 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 EME2A4GXA9 379 aaPredicted RBP14.97□□□□□ -0.01
ERCC3-202ENST00000426778 MAFO75444 373 aaPredicted RBP14.97□□□□□ -0.01
ERCC3-202ENST00000426778 TFE3P19532 575 aaPredicted RBP14.97□□□□□ -0.01
ERCC3-202ENST00000426778 ETV4P43268 484 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 PTPN11Q06124 597 aaPredicted RBP14.97□□□□□ -0.01
ERCC3-202ENST00000426778 THOC5Q13769 683 aaKnown RBP14.97□□□□□ -0.01
ERCC3-202ENST00000426778 WDR78Q5VTH9 848 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 PTCD3Q96EY7 689 aaKnown RBP14.97□□□□□ -0.01
ERCC3-202ENST00000426778 MMP19Q99542 508 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 NIFKQ9BYG3 293 aaKnown RBP14.97□□□□□ -0.01
ERCC3-202ENST00000426778 CXCL16Q9H2A7 254 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 PPARGC1AQ9UBK2 798 aaKnown RBP14.97□□□□□ -0.01
ERCC3-202ENST00000426778 STRIP2Q9ULQ0 834 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 PCDHGC3Q9UN70 934 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 PARP14Q460N5 1801 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 LCTP09848 1927 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 SOWAHBA6NEL2 793 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 MEI4A8MW99 385 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 E7ESA3 106 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 GPR25O00155 361 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 TMPRSS15P98073 1019 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 HSF5Q4G112 596 aaPredicted RBP14.97□□□□□ -0.01
ERCC3-202ENST00000426778 JADE1Q6IE81 842 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 POLNQ7Z5Q5 900 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 DNAJC9Q8WXX5 260 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 APOPT1Q96IL0 206 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 NSL1Q96IY1 281 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 FAM161BQ96MY7 647 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 SYT15Q9BQS2 421 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms