RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 ADGRA3Q8IWK6 1321 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 MMP3P08254 477 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 PRKAR2AP13861 404 aaKnown RBP16.64■□□□□ 0.25
PKP4-205ENST00000426248 STK33Q9BYT3 514 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 HEY2Q9UBP5 337 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 TMEM59LQ9UK28 342 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 DOLKQ9UPQ8 538 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.64■□□□□ 0.25
PKP4-205ENST00000426248 KIAA0391O15091 583 aaKnown RBP16.64■□□□□ 0.25
PKP4-205ENST00000426248 TLR3O15455 904 aaKnown RBP16.64■□□□□ 0.25
PKP4-205ENST00000426248 ENO1P06733 434 aaKnown RBP16.64■□□□□ 0.25
PKP4-205ENST00000426248 PSEN2P49810 448 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 DUPD1Q68J44 220 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 CD99L2Q8TCZ2 262 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 SLC26A7Q8TE54 656 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 KAT5Q92993 513 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 RILPQ96NA2 401 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 MYH15Q9Y2K3 1946 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 SLC10A3P09131 477 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 CXCL8P10145 99 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 EPHB1P54762 984 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 C10orf76Q5T2E6 689 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 HACE1Q8IYU2 909 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 SH3TC2Q8TF17 1288 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 DHX38Q92620 1227 aaKnown RBP16.63■□□□□ 0.25
PKP4-205ENST00000426248 ERLEC1Q96DZ1 483 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 ABHD8Q96I13 439 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 TRIM17Q9Y577 477 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 DNAJC25-GNG10A0A024R161 153 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 B2RBV5 119 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 DDX3XO00571 662 aaKnown RBP eCLIP16.63■□□□□ 0.253e-18■■□□□ 13.6
PKP4-205ENST00000426248 ZWINTO95229 277 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 P4HA1P13674 534 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 NSFP46459 744 aaKnown RBP16.63■□□□□ 0.25
PKP4-205ENST00000426248 TMED10P49755 219 aaKnown RBP16.63■□□□□ 0.25
PKP4-205ENST00000426248 SURF1Q15526 300 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 CCDC80Q76M96 950 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 NIFKQ9BYG3 293 aaKnown RBP16.63■□□□□ 0.25
PKP4-205ENST00000426248 AIPL1Q9NZN9 384 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 ANAPC5Q9UJX4 755 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 GOLGA8RI6L899 631 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 WEE2P0C1S8 567 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 ATF2P15336 505 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 CHRNA3P32297 505 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 CDK7P50613 346 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 DCUN1D2Q6PH85 259 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 PWWP2AQ96N64 755 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 R3HDM2Q9Y2K5 976 aaKnown RBP16.63■□□□□ 0.25
PKP4-205ENST00000426248 NUB1Q9Y5A7 615 aa16.63■□□□□ 0.25
PKP4-205ENST00000426248 SMIM10L2AP0DMW4 78 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 SMIM10L2BP0DMW5 78 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 TNFSF9P41273 254 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 AP1B1Q10567 949 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 ASTE1Q2TB18 679 aaPredicted RBP16.62■□□□□ 0.25
PKP4-205ENST00000426248 EEF1DP3Q658K8 133 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 MPZL3Q6UWV2 235 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 NT5DC3Q86UY8 548 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 ZMAT2Q96NC0 199 aaKnown RBP16.62■□□□□ 0.25
PKP4-205ENST00000426248 DLEC1Q9Y238 1755 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 THPOP40225 353 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 ARFIP2P53365 341 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 SNRPFP62306 86 aaKnown RBP16.62■□□□□ 0.25
PKP4-205ENST00000426248 MOGSQ13724 837 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 SGO2Q562F6 1265 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 ZBTB41Q5SVQ8 909 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 RBM44Q6ZP01 1051 aaKnown RBP16.62■□□□□ 0.25
PKP4-205ENST00000426248 ZBTB8BQ8NAP8 495 aaPredicted RBP16.62■□□□□ 0.25
PKP4-205ENST00000426248 C17orf50Q8WW18 174 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 SERPINB12Q96P63 405 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 ROPN1BQ9BZX4 212 aaPredicted RBP16.62■□□□□ 0.25
PKP4-205ENST00000426248 ROPN1Q9HAT0 212 aaPredicted RBP16.62■□□□□ 0.25
PKP4-205ENST00000426248 ANLNQ9NQW6 1124 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 ARMCX1Q9P291 453 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 PHF2O75151 1096 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 ASLP04424 464 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 TAC1P20366 129 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 ZNF200P98182 395 aaPredicted RBP16.62■□□□□ 0.25
PKP4-205ENST00000426248 VSTM1Q6UX27 236 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 GLT1D1Q96MS3 346 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 ACP6Q9NPH0 428 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 NAALADL1Q9UQQ1 740 aa16.62■□□□□ 0.25
PKP4-205ENST00000426248 ACKR2O00590 384 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 CCDC166P0CW27 439 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 FOXN2P32314 431 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 TAPT1Q6NXT6 567 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 KIAA0319LQ8IZA0 1049 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 BTBD10Q9BSF8 475 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 HES2Q9Y543 173 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 SIPA1L1O43166 1804 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 DYTNA2CJ06 578 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 NOP14P78316 857 aaKnown RBP16.61■□□□□ 0.25
PKP4-205ENST00000426248 SLC30A5Q8TAD4 765 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 FAM118BQ9BPY3 351 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 CADM1Q9BY67 442 aaKnown RBP16.61■□□□□ 0.25
PKP4-205ENST00000426248 TRIM55Q9BYV6 548 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 PPARGC1AQ9UBK2 798 aaKnown RBP16.61■□□□□ 0.25
PKP4-205ENST00000426248 TLL2Q9Y6L7 1015 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.61■□□□□ 0.25
PKP4-205ENST00000426248 CDH16O75309 829 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 GAS8O95995 478 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms