RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 STK32AQ8WU08 396 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 PDCL3Q9H2J4 239 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 AIPL1Q9NZN9 384 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 NCANO14594 1321 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 USP17L7P0C7H9 530 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 CHRNB2P17787 502 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 RPL34P49207 117 aaKnown RBP25.78■■□□□ 1.72
VEGFA-209ENST00000425836 ADIGQ0VDE8 80 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 SFMBT2Q5VUG0 894 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 CCDC186Q7Z3E2 898 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 MON1AQ86VX9 555 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 FMNL3Q8IVF7 1028 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 ULBP1Q9BZM6 244 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 LIMD1Q9UGP4 676 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 CCDC172P0C7W6 258 aa25.77■■□□□ 1.72
VEGFA-209ENST00000425836 LCP1P13796 627 aa25.77■■□□□ 1.72
VEGFA-209ENST00000425836 DDX6P26196 483 aaKnown RBP eCLIP25.77■■□□□ 1.725e-8■□□□□ 10.5
VEGFA-209ENST00000425836 ZBED6P86452 979 aa25.77■■□□□ 1.72
VEGFA-209ENST00000425836 FAM78AQ5JUQ0 283 aa25.77■■□□□ 1.72
VEGFA-209ENST00000425836 SNX30Q5VWJ9 437 aa25.77■■□□□ 1.72
VEGFA-209ENST00000425836 E4F1Q66K89 784 aaPredicted RBP25.77■■□□□ 1.72
VEGFA-209ENST00000425836 PM20D1Q6GTS8 502 aa25.77■■□□□ 1.72
VEGFA-209ENST00000425836 MAB21L3Q8N8X9 362 aa25.77■■□□□ 1.72
VEGFA-209ENST00000425836 ZSCAN18Q8TBC5 510 aaPredicted RBP25.77■■□□□ 1.72
VEGFA-209ENST00000425836 SLC4A5Q9BY07 1137 aa25.77■■□□□ 1.72
VEGFA-209ENST00000425836 CD320Q9NPF0 282 aa25.77■■□□□ 1.72
VEGFA-209ENST00000425836 ST7Q9NRC1 585 aa25.77■■□□□ 1.72
VEGFA-209ENST00000425836 C2orf78A6NCI8 922 aa25.76■■□□□ 1.71
VEGFA-209ENST00000425836 SOBPA7XYQ1 873 aa25.76■■□□□ 1.71
VEGFA-209ENST00000425836 PIK3R2O00459 728 aa25.76■■□□□ 1.71
VEGFA-209ENST00000425836 ZBED1O96006 694 aa25.76■■□□□ 1.71
VEGFA-209ENST00000425836 ABL1P00519 1130 aa25.76■■□□□ 1.71
VEGFA-209ENST00000425836 ZNF75DP51815 510 aa25.76■■□□□ 1.71
VEGFA-209ENST00000425836 FMO1Q01740 532 aa25.76■■□□□ 1.71
VEGFA-209ENST00000425836 GJD3Q8N144 294 aa25.76■■□□□ 1.71
VEGFA-209ENST00000425836 SIX6OS1Q8N1H7 587 aa25.76■■□□□ 1.71
VEGFA-209ENST00000425836 C1orf131Q8NDD1 294 aaKnown RBP25.76■■□□□ 1.71
VEGFA-209ENST00000425836 ZNF397Q8NF99 534 aaPredicted RBP25.76■■□□□ 1.71
VEGFA-209ENST00000425836 ST13P5Q8NFI4 369 aaPredicted RBP25.76■■□□□ 1.71
VEGFA-209ENST00000425836 ASB16Q96NS5 453 aa25.76■■□□□ 1.71
VEGFA-209ENST00000425836 TRPC7Q9HCX4 862 aa25.76■■□□□ 1.71
VEGFA-209ENST00000425836 ZMYM5Q9UJ78 669 aa25.76■■□□□ 1.71
VEGFA-209ENST00000425836 LUC7L2Q9Y383 392 aaKnown RBP25.76■■□□□ 1.71
VEGFA-209ENST00000425836 CEP83Q9Y592 693 aa25.76■■□□□ 1.71
VEGFA-209ENST00000425836 CASP14P31944 242 aa25.75■■□□□ 1.71
VEGFA-209ENST00000425836 CDH5P33151 784 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-209ENST00000425836 PDCLQ13371 301 aa25.75■■□□□ 1.71
VEGFA-209ENST00000425836 ASIC2Q16515 512 aa25.75■■□□□ 1.71
VEGFA-209ENST00000425836 SCD5Q86SK9 330 aa25.75■■□□□ 1.71
VEGFA-209ENST00000425836 TMEM110Q86TL2 294 aa25.75■■□□□ 1.71
VEGFA-209ENST00000425836 TMEM35BQ8NCS4 154 aa25.75■■□□□ 1.71
VEGFA-209ENST00000425836 NDRG1Q92597 394 aaKnown RBP25.75■■□□□ 1.71
VEGFA-209ENST00000425836 SMARCD2Q92925 531 aa25.75■■□□□ 1.71
VEGFA-209ENST00000425836 UHRF1Q96T88 793 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-209ENST00000425836 NMUR1Q9HB89 426 aa25.75■■□□□ 1.71
VEGFA-209ENST00000425836 CNGB3Q9NQW8 809 aa25.75■■□□□ 1.71
VEGFA-209ENST00000425836 TLR8Q9NR97 1041 aaKnown RBP25.75■■□□□ 1.71
VEGFA-209ENST00000425836 A0A1W2PQH9 124 aa25.74■■□□□ 1.71
VEGFA-209ENST00000425836 ANHXE9PGG2 379 aa25.74■■□□□ 1.71
VEGFA-209ENST00000425836 ACADSBP45954 432 aa25.74■■□□□ 1.71
VEGFA-209ENST00000425836 PARM1Q6UWI2 310 aa25.74■■□□□ 1.71
VEGFA-209ENST00000425836 BHLHA9Q7RTU4 235 aa25.74■■□□□ 1.71
VEGFA-209ENST00000425836 CMTM8Q8IZV2 173 aa25.74■■□□□ 1.71
VEGFA-209ENST00000425836 SCML4Q8N228 414 aa25.74■■□□□ 1.71
VEGFA-209ENST00000425836 SLC22A12Q96S37 553 aa25.74■■□□□ 1.71
VEGFA-209ENST00000425836 CYP2S1Q96SQ9 504 aa25.74■■□□□ 1.71
VEGFA-209ENST00000425836 NUCKS1Q9H1E3 243 aaKnown RBP25.74■■□□□ 1.71
VEGFA-209ENST00000425836 CYLDQ9NQC7 956 aa25.74■■□□□ 1.71
VEGFA-209ENST00000425836 OSER1Q9NX31 292 aa25.74■■□□□ 1.71
VEGFA-209ENST00000425836 LSM8O95777 96 aaKnown RBP25.73■■□□□ 1.71
VEGFA-209ENST00000425836 TRIM14Q14142 442 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 ARID3BQ8IVW6 561 aaPredicted RBP25.73■■□□□ 1.71
VEGFA-209ENST00000425836 SYN2Q92777 582 aaPredicted RBP25.73■■□□□ 1.71
VEGFA-209ENST00000425836 FGF14Q92915 247 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 PPP1R13BQ96KQ4 1090 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 CPXM1Q96SM3 734 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 PCDHB18PQ96TA0 734 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 AGPAT1Q99943 283 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 TRPV4Q9HBA0 871 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 GREB1Q4ZG55 1949 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 E5RJQ4 531 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 OAS1P00973 400 aaKnown RBP25.73■■□□□ 1.71
VEGFA-209ENST00000425836 FCARP24071 287 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 WEE1P30291 646 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 HTR4Q13639 388 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 HECTD3Q5T447 861 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 TANGO2Q6ICL3 276 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 ARL14EPQ8N8R7 260 aaPredicted RBP25.73■■□□□ 1.71
VEGFA-209ENST00000425836 RSAD2Q8WXG1 361 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 MRFAP1L1Q96HT8 127 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 NOX5Q96PH1 765 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 SYT11Q9BT88 431 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 MIS12Q9H081 205 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 KCNK12Q9HB15 430 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 TJP2Q9UDY2 1190 aa25.73■■□□□ 1.71
VEGFA-209ENST00000425836 TCF20Q9UGU0 1960 aaKnown RBP25.72■■□□□ 1.71
VEGFA-209ENST00000425836 FBXO21O94952 628 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 CYP1A1P04798 512 aaPredicted RBP25.72■■□□□ 1.71
VEGFA-209ENST00000425836 PFKLP17858 780 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 HDCP19113 662 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms