RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 OASLQ15646 514 aaKnown RBP12.47□□□□□ -0.41
PTPRN-204ENST00000423636 SLC1A5Q15758 541 aa12.47□□□□□ -0.41
PTPRN-204ENST00000423636 LDLRAD1Q5T700 205 aa12.47□□□□□ -0.41
PTPRN-204ENST00000423636 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.47□□□□□ -0.41
PTPRN-204ENST00000423636 P3H4Q92791 437 aa12.47□□□□□ -0.41
PTPRN-204ENST00000423636 FAF2Q96CS3 445 aa12.47□□□□□ -0.41
PTPRN-204ENST00000423636 RMDN2Q96LZ7 410 aa12.47□□□□□ -0.41
PTPRN-204ENST00000423636 INPP5FQ9Y2H2 1132 aa12.47□□□□□ -0.41
PTPRN-204ENST00000423636 TTLL3Q9Y4R7 772 aa12.47□□□□□ -0.41
PTPRN-204ENST00000423636 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.46□□□□□ -0.41
PTPRN-204ENST00000423636 MED7O43513 233 aa12.46□□□□□ -0.41
PTPRN-204ENST00000423636 USP12O75317 370 aa12.46□□□□□ -0.41
PTPRN-204ENST00000423636 GPD1P21695 349 aa12.46□□□□□ -0.41
PTPRN-204ENST00000423636 TKTP29401 623 aaKnown RBP12.46□□□□□ -0.41
PTPRN-204ENST00000423636 WDR4P57081 412 aaKnown RBP12.46□□□□□ -0.41
PTPRN-204ENST00000423636 ZNF484Q5JVG2 852 aa12.46□□□□□ -0.41
PTPRN-204ENST00000423636 TRMT10CQ7L0Y3 403 aaKnown RBP12.46□□□□□ -0.41
PTPRN-204ENST00000423636 VCPIP1Q96JH7 1222 aa12.46□□□□□ -0.41
PTPRN-204ENST00000423636 AGAP3Q96P47 875 aa12.46□□□□□ -0.41
PTPRN-204ENST00000423636 KCNK16Q96T55 309 aa12.46□□□□□ -0.41
PTPRN-204ENST00000423636 LGMNQ99538 433 aa12.46□□□□□ -0.41
PTPRN-204ENST00000423636 BCO2Q9BYV7 579 aa12.46□□□□□ -0.41
PTPRN-204ENST00000423636 KATNBL1Q9H079 304 aa12.46□□□□□ -0.41
PTPRN-204ENST00000423636 ZNF395Q9H8N7 513 aaPredicted RBP12.46□□□□□ -0.41
PTPRN-204ENST00000423636 SAMD15Q9P1V8 674 aa12.46□□□□□ -0.41
PTPRN-204ENST00000423636 RGPD3A6NKT7 1758 aaPredicted RBP12.46□□□□□ -0.41
PTPRN-204ENST00000423636 RGPD4Q7Z3J3 1758 aa12.46□□□□□ -0.41
PTPRN-204ENST00000423636 A0A087WUV0 522 aaPredicted RBP12.46□□□□□ -0.42
PTPRN-204ENST00000423636 CCDC195A0A1B0GUA6 201 aa12.46□□□□□ -0.42
PTPRN-204ENST00000423636 A8MUI8 341 aa12.46□□□□□ -0.42
PTPRN-204ENST00000423636 RNASELQ05823 741 aaKnown RBP12.46□□□□□ -0.42
PTPRN-204ENST00000423636 DCAF6Q58WW2 860 aa12.46□□□□□ -0.42
PTPRN-204ENST00000423636 RNASEH2BQ5TBB1 312 aaKnown RBP12.46□□□□□ -0.42
PTPRN-204ENST00000423636 HFE2Q6ZVN8 426 aa12.46□□□□□ -0.42
PTPRN-204ENST00000423636 PLEKHH3Q7Z736 793 aa12.46□□□□□ -0.42
PTPRN-204ENST00000423636 MPP5Q8N3R9 675 aa12.46□□□□□ -0.42
PTPRN-204ENST00000423636 CCDC197Q8NCU1 140 aa12.46□□□□□ -0.42
PTPRN-204ENST00000423636 SNRNP25Q9BV90 132 aaKnown RBP12.46□□□□□ -0.42
PTPRN-204ENST00000423636 SLC13A1Q9BZW2 595 aa12.46□□□□□ -0.42
PTPRN-204ENST00000423636 SLC17A7Q9P2U7 560 aa12.46□□□□□ -0.42
PTPRN-204ENST00000423636 CLUHO75153 1309 aa12.46□□□□□ -0.42
PTPRN-204ENST00000423636 PRRC2BQ5JSZ5 2229 aaKnown RBP12.46□□□□□ -0.42
PTPRN-204ENST00000423636 DNAH14Q0VDD8 3507 aa12.46□□□□□ -0.42
PTPRN-204ENST00000423636 UBOX5O94941 541 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 ZNF157P51786 506 aaPredicted RBP12.45□□□□□ -0.42
PTPRN-204ENST00000423636 TAF1CQ15572 869 aaPredicted RBP12.45□□□□□ -0.42
PTPRN-204ENST00000423636 CASC4Q6P4E1 433 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 KCNV1Q6PIU1 500 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 KDELC2Q7Z4H8 507 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 EIF1ADQ8N9N8 165 aaKnown RBP12.45□□□□□ -0.42
PTPRN-204ENST00000423636 CCDC63Q8NA47 563 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 PPM1EQ8WY54 764 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 EDEM1Q92611 657 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 PRCCQ92733 491 aaPredicted RBP12.45□□□□□ -0.42
PTPRN-204ENST00000423636 WNT8BQ93098 351 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 RUNDC3BQ96NL0 473 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 TRABDQ9H4I3 376 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 ATP8B3O60423 1300 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 MCF2LO15068 1137 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 AMHP03971 560 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 MCF2P10911 925 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 MNAT1P51948 309 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 DUSP28Q4G0W2 176 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 TAOK1Q7L7X3 1001 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 AGGF1Q8N302 714 aaeCLIP12.45□□□□□ -0.42
PTPRN-204ENST00000423636 MED10Q9BTT4 135 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 HESX1Q9UBX0 185 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 SMIM28A0A1B0GU29 152 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 GOT1P17174 413 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 ADRA1DP25100 572 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 GNL1P36915 607 aaPredicted RBP12.45□□□□□ -0.42
PTPRN-204ENST00000423636 BCAR1P56945 870 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 MAP3K7CLP57077 242 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 SLC10A2Q12908 348 aaPredicted RBP12.45□□□□□ -0.42
PTPRN-204ENST00000423636 DPYSL3Q14195 570 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 WSCD1Q658N2 575 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 CEP57Q86XR8 500 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 ZCCHC9Q8N567 271 aaKnown RBP12.45□□□□□ -0.42
PTPRN-204ENST00000423636 PPM1NQ8N819 430 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 CCNYQ8ND76 341 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 PCDH19Q8TAB3 1148 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 APOL2Q9BQE5 337 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 NKIRAS1Q9NYS0 192 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 PCDHGC3Q9UN70 934 aa12.45□□□□□ -0.42
PTPRN-204ENST00000423636 KBTBD13C9JR72 458 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 IL18RAPO95256 599 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 LSM8O95777 96 aaKnown RBP12.44□□□□□ -0.42
PTPRN-204ENST00000423636 SDC4P31431 198 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 ADIGQ0VDE8 80 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 ZNF449Q6P9G9 518 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 PNPLA1Q8N8W4 532 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 MAIP1Q8WWC4 291 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 TMEM237Q96Q45 408 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 GAD1Q99259 594 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 MECRQ9BV79 373 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 UBP1Q9NZI7 540 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 C2CD4BA6NLJ0 364 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 CXorf49A8MYA2 514 aaPredicted RBP12.44□□□□□ -0.42
PTPRN-204ENST00000423636 POMCP01189 267 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 HNRNPH1P31943 449 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms