RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 HEY1Q9Y5J3 304 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 TEX264Q9Y6I9 313 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 LACTBL1A8MY62 500 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 GPD2P43304 727 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 ARFIP2P53365 341 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 SESN3P58005 492 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 ZNF200P98182 395 aaPredicted RBP16.47■□□□□ 0.23
CDH1-202ENST00000422392 SURF1Q15526 300 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 MAP1SQ66K74 1059 aaPredicted RBP16.47■□□□□ 0.23
CDH1-202ENST00000422392 JADE1Q6IE81 842 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 DSTYKQ6XUX3 929 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 CCDC33Q8N5R6 958 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 PPM1NQ8N819 430 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 HEXIM2Q96MH2 286 aaKnown RBP16.47■□□□□ 0.23
CDH1-202ENST00000422392 RPF1Q9H9Y2 349 aaKnown RBP16.47■□□□□ 0.23
CDH1-202ENST00000422392 RAB6BQ9NRW1 208 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 PTPRFP10586 1907 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 CXorf49A8MYA2 514 aaPredicted RBP16.47■□□□□ 0.23
CDH1-202ENST00000422392 NOP56O00567 594 aaKnown RBP16.47■□□□□ 0.23
CDH1-202ENST00000422392 ACKR2O00590 384 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 RXRBP28702 533 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 IGBP1P78318 339 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 KCNJ11Q14654 390 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 NOMO1Q15155 1222 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 SCYL2Q6P3W7 929 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 SLC44A1Q8WWI5 657 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 MCRS1Q96EZ8 462 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 NAF1Q96HR8 494 aaKnown RBP16.47■□□□□ 0.23
CDH1-202ENST00000422392 APOPT1Q96IL0 206 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 GPR20Q99678 358 aa16.47■□□□□ 0.23
CDH1-202ENST00000422392 IQANK1A0A1B0GTG1 560 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 KCNN4O15554 427 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 UGT1A9O60656 530 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 HAUS5O94927 633 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 RGS7P49802 495 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 NEK3P51956 506 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 ZBTB16Q05516 673 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 KHDC1Q4VXA5 237 aaKnown RBP16.46■□□□□ 0.23
CDH1-202ENST00000422392 ZC3H12AQ5D1E8 599 aaKnown RBP16.46■□□□□ 0.23
CDH1-202ENST00000422392 LBX2Q6XYB7 198 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 SH2D5Q6ZV89 423 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 C12orf29Q8N999 325 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 RXFP2Q8WXD0 754 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 TMEM176AQ96HP8 235 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 PHACTR1Q9C0D0 580 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 ZNF395Q9H8N7 513 aaPredicted RBP16.46■□□□□ 0.23
CDH1-202ENST00000422392 RSAD1Q9HA92 442 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 UGT1A7Q9HAW7 530 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 UGT1A10Q9HAW8 530 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 UGT1A8Q9HAW9 530 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 GGA3Q9NZ52 723 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 ARMCX1Q9P291 453 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.46■□□□□ 0.23
CDH1-202ENST00000422392 TRAFD1O14545 582 aaPredicted RBP16.46■□□□□ 0.23
CDH1-202ENST00000422392 CILPO75339 1184 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 PDGFRAP16234 1089 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 CYP3A5P20815 502 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 EDNRBP24530 442 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 PTDSS1P48651 473 aaKnown RBP16.46■□□□□ 0.23
CDH1-202ENST00000422392 CCNG1P51959 295 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 BMPR2Q13873 1038 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 PRKD1Q15139 912 aaPredicted RBP16.46■□□□□ 0.23
CDH1-202ENST00000422392 OR6B2Q6IFH4 312 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 MICAL1Q8TDZ2 1067 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 ALKBH8Q96BT7 664 aaKnown RBP16.46■□□□□ 0.23
CDH1-202ENST00000422392 FRMD8P1Q9BZ68 369 aaPredicted RBP16.46■□□□□ 0.23
CDH1-202ENST00000422392 WDR35Q9P2L0 1181 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 LNPEPQ9UIQ6 1025 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 SSC5DA1L4H1 1573 aa16.46■□□□□ 0.23
CDH1-202ENST00000422392 FAM237BA0A1B0GVD1 139 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 TRIM49D1C9J1S8 452 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 DHRS4L1P0CG22 281 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 EFCAB12Q6NXP0 572 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 FAM183BPQ6ZVS7 135 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 APBB1IPQ7Z5R6 666 aaPredicted RBP16.45■□□□□ 0.22
CDH1-202ENST00000422392 DEFB132Q7Z7B7 95 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 CPB2Q96IY4 423 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 FZD8Q9H461 694 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 USP29Q9HBJ7 922 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 ASNSD1Q9NWL6 643 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 SCN1AP35498 2009 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 IGKV6-21A0A0C4DH24 114 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 CCDC195A0A1B0GUA6 201 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 HMGCRP04035 888 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 DLDP09622 509 aaKnown RBP16.45■□□□□ 0.22
CDH1-202ENST00000422392 MYL2P10916 166 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 RBL1P28749 1068 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 CPA2P48052 419 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 ZNF143P52747 638 aaPredicted RBP16.45■□□□□ 0.22
CDH1-202ENST00000422392 YWHAZP63104 245 aaKnown RBP16.45■□□□□ 0.22
CDH1-202ENST00000422392 MBTD1Q05BQ5 628 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 RINLQ6ZS11 566 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 ALYREFQ86V81 257 aaKnown RBP16.45■□□□□ 0.22
CDH1-202ENST00000422392 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.45■□□□□ 0.22
CDH1-202ENST00000422392 PTCD3Q96EY7 689 aaKnown RBP16.45■□□□□ 0.22
CDH1-202ENST00000422392 SRPK1Q96SB4 655 aaKnown RBP16.45■□□□□ 0.22
CDH1-202ENST00000422392 SLC13A1Q9BZW2 595 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 SAR1AQ9NR31 198 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 PAPPA2Q9BXP8 1791 aa16.45■□□□□ 0.22
CDH1-202ENST00000422392 CYB561D2O14569 222 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms