RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 KIAA1257Q9ULG3 409 aa9.15□□□□□ -0.94
MDC1-204ENST00000422266 SLC8A2Q9UPR5 921 aa9.15□□□□□ -0.94
MDC1-204ENST00000422266 COQ4Q9Y3A0 265 aa9.15□□□□□ -0.94
MDC1-204ENST00000422266 SH3BP1Q9Y3L3 701 aa9.15□□□□□ -0.94
MDC1-204ENST00000422266 RIF1Q5UIP0 2472 aaKnown RBP9.15□□□□□ -0.94
MDC1-204ENST00000422266 CHURC1-FNTBB4DL54 471 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 TNFRSF10BO14763 440 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 PMM2O15305 246 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 LRP3O75074 770 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 CILPO75339 1184 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 RALAP11233 206 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 GJA4P35212 333 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 ATP5C1P36542 298 aaKnown RBP9.14□□□□□ -0.95
MDC1-204ENST00000422266 MAP3K7CLP57077 242 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 UBE2HP62256 183 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 FOXK2Q01167 660 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 IFRD2Q12894 506 aaPredicted RBP9.14□□□□□ -0.95
MDC1-204ENST00000422266 E2F5Q15329 346 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 CCDC142Q17RM4 750 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 C1orf220Q5T0J3 134 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 BTBD8Q5XKL5 378 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 ANKRD40Q6AI12 368 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 TRIM68Q6AZZ1 485 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 SMYD5Q6GMV2 418 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 TXNDC11Q6PKC3 985 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 SMYD4Q8IYR2 804 aaPredicted RBP9.14□□□□□ -0.95
MDC1-204ENST00000422266 ZNF276Q8N554 614 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 TTC8Q8TAM2 541 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 TMEM176AQ96HP8 235 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 FAM81BQ96LP2 452 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 HEXIM2Q96MH2 286 aaKnown RBP9.14□□□□□ -0.95
MDC1-204ENST00000422266 SLC22A12Q96S37 553 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 KCNK16Q96T55 309 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 UBXN6Q9BZV1 441 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 SDCBP2Q9H190 292 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.14□□□□□ -0.95
MDC1-204ENST00000422266 HESX1Q9UBX0 185 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 LSM7Q9UK45 103 aaKnown RBP9.14□□□□□ -0.95
MDC1-204ENST00000422266 SCML2Q9UQR0 700 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 ZNF510Q9Y2H8 683 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 NME7Q9Y5B8 376 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 CPQQ9Y646 472 aa9.14□□□□□ -0.95
MDC1-204ENST00000422266 PTPRDP23468 1912 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 COCHO43405 550 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 TLR5O60602 858 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 ZDHHC11BP0C7U3 371 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 CCDC192P0DO97 292 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 CCDC130P13994 396 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 ARSAP15289 507 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 CD58P19256 250 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 GALK1P51570 392 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 CACNA2D1P54289 1103 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 GAD2Q05329 585 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 STILQ15468 1287 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 CCDC40Q4G0X9 1142 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 LAIR1Q6GTX8 287 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 SPOPLQ6IQ16 392 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 CLEC20AQ6ZU45 233 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 PAQR9Q6ZVX9 377 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 SYT13Q7L8C5 426 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 TRMT11Q7Z4G4 463 aaKnown RBP9.13□□□□□ -0.95
MDC1-204ENST00000422266 C11orf74Q86VG3 221 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 WDR5BQ86VZ2 330 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 ADGRG2Q8IZP9 1017 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 C12orf29Q8N999 325 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 SUMF1Q8NBK3 374 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 KCNV2Q8TDN2 545 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 SMOQ99835 787 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 DUSP16Q9BY84 665 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 RNF38Q9H0F5 515 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 APOBEC3GQ9HC16 384 aaKnown RBP9.13□□□□□ -0.95
MDC1-204ENST00000422266 CYLDQ9NQC7 956 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 CISHQ9NSE2 258 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 FAM49BQ9NUQ9 324 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 CHMP5Q9NZZ3 219 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 CHORDC1Q9UHD1 332 aaPredicted RBP9.13□□□□□ -0.95
MDC1-204ENST00000422266 SMG5Q9UPR3 1016 aaKnown RBP9.13□□□□□ -0.95
MDC1-204ENST00000422266 WNT6Q9Y6F9 365 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 COL4A2P08572 1712 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 GREB1Q4ZG55 1949 aa9.13□□□□□ -0.95
MDC1-204ENST00000422266 ZFHX2Q9C0A1 2572 aaPredicted RBP9.13□□□□□ -0.95
MDC1-204ENST00000422266 PATJQ8NI35 1801 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 FANCMQ8IYD8 2048 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 PRR5-ARHGAP8B1AHC4 643 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 APODP05090 189 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 ADH5P11766 374 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 TDGF1P13385 188 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 ACO1P21399 889 aaKnown RBP9.12□□□□□ -0.95
MDC1-204ENST00000422266 ADORA2BP29275 332 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 PLA2G4AP47712 749 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 BCAT1P54687 386 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 MRPS21P82921 87 aaKnown RBP9.12□□□□□ -0.95
MDC1-204ENST00000422266 COG7P83436 770 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 ARHGAP8P85298 464 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 SATB1Q01826 763 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 PAK1Q13153 545 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 CUL2Q13617 745 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 SIM2Q14190 667 aaPredicted RBP9.12□□□□□ -0.95
MDC1-204ENST00000422266 DHCR24Q15392 516 aa9.12□□□□□ -0.95
MDC1-204ENST00000422266 SGO2Q562F6 1265 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms