RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 S1PR5Q9H228 398 aa7.52□□□□□ -1.21
HMGN1-205ENST00000419378 TNMDQ9H2S6 317 aa7.52□□□□□ -1.21
HMGN1-205ENST00000419378 RXFP1Q9HBX9 757 aa7.52□□□□□ -1.21
HMGN1-205ENST00000419378 OLFML3Q9NRN5 406 aa7.52□□□□□ -1.21
HMGN1-205ENST00000419378 CHST7Q9NS84 486 aa7.52□□□□□ -1.21
HMGN1-205ENST00000419378 SLC38A7Q9NVC3 462 aa7.52□□□□□ -1.21
HMGN1-205ENST00000419378 SEL1LQ9UBV2 794 aa7.52□□□□□ -1.21
HMGN1-205ENST00000419378 TPX2Q9ULW0 747 aaKnown RBP7.52□□□□□ -1.21
HMGN1-205ENST00000419378 PCDHA7Q9UN72 937 aa7.52□□□□□ -1.21
HMGN1-205ENST00000419378 PLXNA3P51805 1871 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 VWA8A3KMH1 1905 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 A0A0B4J269 797 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 TISP43B9A030 160 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 OGTO15294 1046 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 TEX28O15482 410 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 PDPK1O15530 556 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 B3GAT3O94766 335 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 CLTAP09496 248 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 MYBP10242 640 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 IDEP14735 1019 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 HOXB8P17481 243 aaPredicted RBP7.51□□□□□ -1.21
HMGN1-205ENST00000419378 KLRC2P26717 231 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 TNFSF9P41273 254 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 CASP5P51878 434 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 KRT85P78386 507 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 CREMQ03060 361 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 ELAVL2Q12926 359 aaKnown RBP7.51□□□□□ -1.21
HMGN1-205ENST00000419378 BECN1Q14457 450 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 CBX2Q14781 532 aaPredicted RBP7.51□□□□□ -1.21
HMGN1-205ENST00000419378 UPP1Q16831 310 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 HERC4Q5GLZ8 1057 aaPredicted RBP7.51□□□□□ -1.21
HMGN1-205ENST00000419378 RESP18Q5W5W9 173 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 DCLRE1AQ6PJP8 1040 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 PRSS55Q6UWB4 352 aaPredicted RBP7.51□□□□□ -1.21
HMGN1-205ENST00000419378 CD300LGQ6UXG3 332 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 ZNF720Q7Z2F6 126 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 ZAR1Q86SH2 424 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 GPR65Q8IYL9 337 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 FBXL6Q8N531 539 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 C12orf76Q8N812 135 aaPredicted RBP7.51□□□□□ -1.21
HMGN1-205ENST00000419378 IQUBQ8NA54 791 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 RIN2Q8WYP3 895 aaPredicted RBP7.51□□□□□ -1.21
HMGN1-205ENST00000419378 STAMQ92783 540 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 C18orf25Q96B23 403 aaPredicted RBP7.51□□□□□ -1.21
HMGN1-205ENST00000419378 MFSD14AQ96MC6 490 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 FBXL18Q96ME1 805 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 STRA6Q9BX79 667 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 FGFBP2Q9BYJ0 223 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 LRRC27Q9C0I9 530 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 IKZF4Q9H2S9 585 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 ADAM7Q9H2U9 754 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 CUEDC2Q9H467 287 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 MRPL44Q9H9J2 332 aaKnown RBP7.51□□□□□ -1.21
HMGN1-205ENST00000419378 PANK4Q9NVE7 773 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 TBC1D7Q9P0N9 293 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 TUBGCP4Q9UGJ1 667 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 CDH22Q9UJ99 828 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 RCOR1Q9UKL0 485 aa7.51□□□□□ -1.21
HMGN1-205ENST00000419378 TTC26A0AVF1 554 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 FAM170BA6NMN3 283 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 ANKRD63C9JTQ0 380 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 I3L4J1 428 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 PODXLO00592 558 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 POLR2DO15514 142 aaKnown RBP7.5□□□□□ -1.21
HMGN1-205ENST00000419378 GCNT3O95395 438 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 GLUD1P00367 558 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 RPL17P18621 184 aaKnown RBP7.5□□□□□ -1.21
HMGN1-205ENST00000419378 BRCC3P46736 316 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 ASIC1P78348 528 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 ITIH3Q06033 890 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 SPAG1Q07617 926 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 DOC2BQ14184 412 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 PSMD5Q16401 504 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 KYAT1Q16773 422 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 RARS2Q5T160 578 aaKnown RBP7.5□□□□□ -1.21
HMGN1-205ENST00000419378 L1TD1Q5T7N2 865 aaKnown RBP7.5□□□□□ -1.21
HMGN1-205ENST00000419378 FAM171A1Q5VUB5 890 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 ADALQ6DHV7 355 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 CES5AQ6NT32 575 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 CNNM4Q6P4Q7 775 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 OGFOD3Q6PK18 319 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 CCDC65Q8IXS2 484 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 FEZF2Q8TBJ5 459 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 LEO1Q8WVC0 666 aaPredicted RBP7.5□□□□□ -1.21
HMGN1-205ENST00000419378 HPS3Q969F9 1004 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 ACCSQ96QU6 501 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 TTPALQ9BTX7 342 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 PHF7Q9BWX1 381 aaPredicted RBP7.5□□□□□ -1.21
HMGN1-205ENST00000419378 TRIM9Q9C026 710 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 MKRN2Q9H000 416 aaKnown RBP7.5□□□□□ -1.21
HMGN1-205ENST00000419378 SFXN1Q9H9B4 322 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 PLEKHA5Q9HAU0 1116 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 MAGEF1Q9HAY2 307 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.5□□□□□ -1.21
HMGN1-205ENST00000419378 FNIP2Q9P278 1114 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 CPSF3Q9UKF6 684 aaKnown RBP7.5□□□□□ -1.21
HMGN1-205ENST00000419378 KCNH3Q9ULD8 1083 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 EXOC7Q9UPT5 735 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 STYXL1Q9Y6J8 313 aa7.5□□□□□ -1.21
HMGN1-205ENST00000419378 DENND4AQ7Z401 1863 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms