RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 TMEM62Q0P6H9 643 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 TARBP2Q15633 366 aaKnown RBP12.41□□□□□ -0.42
LIMK1-202ENST00000418310 MAP1SQ66K74 1059 aaPredicted RBP12.41□□□□□ -0.42
LIMK1-202ENST00000418310 ZPBP2Q6X784 338 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 TDRPQ86YL5 185 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 UNC5BQ8IZJ1 945 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 AGGF1Q8N302 714 aaeCLIP12.41□□□□□ -0.42
LIMK1-202ENST00000418310 KLRG1Q96E93 195 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 CYTH2Q99418 400 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 NIFKQ9BYG3 293 aaKnown RBP12.41□□□□□ -0.42
LIMK1-202ENST00000418310 TMEM134Q9H6X4 195 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 IL1RAPL1Q9NZN1 696 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 SENP1Q9P0U3 644 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 A0A087WZ62 844 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 PRPSAP2O60256 369 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 TFE3P19532 575 aaPredicted RBP12.4□□□□□ -0.42
LIMK1-202ENST00000418310 GRIA1P42261 906 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 KHDC1Q4VXA5 237 aaKnown RBP12.4□□□□□ -0.42
LIMK1-202ENST00000418310 CASC4Q6P4E1 433 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 DRICH1Q6PGQ1 229 aaPredicted RBP12.4□□□□□ -0.42
LIMK1-202ENST00000418310 SCUBE3Q8IX30 993 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 FDXACB1Q9BRP7 624 aaPredicted RBP12.4□□□□□ -0.42
LIMK1-202ENST00000418310 CXCL16Q9H2A7 254 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 SLC5A4Q9NY91 659 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 COPEO14579 308 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 GYG2O15488 501 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 TRUB2O95900 331 aaKnown RBP12.4□□□□□ -0.42
LIMK1-202ENST00000418310 ZBED1O96006 694 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 ENO1P06733 434 aaKnown RBP12.4□□□□□ -0.42
LIMK1-202ENST00000418310 STAG3L1P0CL83 205 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 EFNA5P52803 228 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 NDST1P52848 882 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 ZNF280AP59817 542 aaPredicted RBP12.4□□□□□ -0.42
LIMK1-202ENST00000418310 KDSRQ06136 332 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 GLRA4Q5JXX5 417 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 ADGRD1Q6QNK2 874 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 FAM183BPQ6ZVS7 135 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.4□□□□□ -0.42
LIMK1-202ENST00000418310 BANPQ8N9N5 519 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 CAMKK2Q96RR4 588 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 SHCBP1LQ9BZQ2 653 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 RNPEPL1Q9HAU8 725 aa12.4□□□□□ -0.42
LIMK1-202ENST00000418310 MYO18AQ92614 2054 aaKnown RBP12.4□□□□□ -0.42
LIMK1-202ENST00000418310 APOC4-APOC2K7ER74 178 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 KRT36O76013 467 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 ATG7O95352 703 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 APOC2P02655 101 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 PHKA2P46019 1235 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 TMPRSS15P98073 1019 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 VGLL4Q14135 290 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 KPNB1Q14974 876 aaKnown RBP12.39□□□□□ -0.43
LIMK1-202ENST00000418310 IER5Q5VY09 327 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 TRMT10BQ6PF06 316 aaKnown RBP12.39□□□□□ -0.43
LIMK1-202ENST00000418310 PCGF5Q86SE9 256 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 ARID3BQ8IVW6 561 aaPredicted RBP12.39□□□□□ -0.43
LIMK1-202ENST00000418310 YIPF3Q9GZM5 350 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 RNPEPQ9H4A4 650 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 ZC3H7BQ9UGR2 993 aaKnown RBP12.39□□□□□ -0.43
LIMK1-202ENST00000418310 KCNG1Q9UIX4 513 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 TSPAN16Q9UKR8 245 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 MED7O43513 233 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 ABL2P42684 1182 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 ACOT1Q86TX2 421 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 TTC13Q8NBP0 860 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 TMEM176AQ96HP8 235 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 APOL6Q9BWW8 343 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 CADM1Q9BY67 442 aaKnown RBP12.39□□□□□ -0.43
LIMK1-202ENST00000418310 ELP3Q9H9T3 547 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 PPARGC1AQ9UBK2 798 aaKnown RBP12.39□□□□□ -0.43
LIMK1-202ENST00000418310 C19orf81C9J6K1 198 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 MAGEB2O15479 319 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 ESRRAP11474 423 aaPredicted RBP12.39□□□□□ -0.43
LIMK1-202ENST00000418310 PTDSS1P48651 473 aaKnown RBP12.39□□□□□ -0.43
LIMK1-202ENST00000418310 OAZ1P54368 228 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 BCAR1P56945 870 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 TAP1Q03518 808 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 RCN1Q15293 331 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 MUM1Q2TAK8 710 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 METTL7BQ6UX53 244 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 MPP5Q8N3R9 675 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 NAF1Q96HR8 494 aaKnown RBP12.39□□□□□ -0.43
LIMK1-202ENST00000418310 HPDLQ96IR7 371 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 CLPTM1LQ96KA5 538 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 SRPK1Q96SB4 655 aaKnown RBP12.39□□□□□ -0.43
LIMK1-202ENST00000418310 ZNF518BQ9C0D4 1074 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 NMUR2Q9GZQ4 415 aa12.39□□□□□ -0.43
LIMK1-202ENST00000418310 IQANK1A0A1B0GTG1 560 aa12.38□□□□□ -0.43
LIMK1-202ENST00000418310 H3BRJ5 948 aa12.38□□□□□ -0.43
LIMK1-202ENST00000418310 TPBGLP0DKB5 382 aa12.38□□□□□ -0.43
LIMK1-202ENST00000418310 GCKP35557 465 aa12.38□□□□□ -0.43
LIMK1-202ENST00000418310 MCCD1P59942 119 aaPredicted RBP12.38□□□□□ -0.43
LIMK1-202ENST00000418310 MXRA7P84157 204 aa12.38□□□□□ -0.43
LIMK1-202ENST00000418310 ZNF772Q68DY9 489 aaPredicted RBP12.38□□□□□ -0.43
LIMK1-202ENST00000418310 C16orf46Q6P387 395 aa12.38□□□□□ -0.43
LIMK1-202ENST00000418310 RINLQ6ZS11 566 aa12.38□□□□□ -0.43
LIMK1-202ENST00000418310 SLC25A41Q8N5S1 370 aa12.38□□□□□ -0.43
LIMK1-202ENST00000418310 FBXO27Q8NI29 283 aa12.38□□□□□ -0.43
LIMK1-202ENST00000418310 STK32AQ8WU08 396 aa12.38□□□□□ -0.43
LIMK1-202ENST00000418310 ATXN7L3BQ96GX2 97 aa12.38□□□□□ -0.43
LIMK1-202ENST00000418310 RILPQ96NA2 401 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms