RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 PSTPIP1O43586 416 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 SUPT20HL2P0C7V6 817 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 TPH1P17752 444 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 GCAP28676 217 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 SLC8A3P57103 927 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 BST1Q10588 318 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 CA9Q16790 459 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 SUPT20HL1Q3ZLR7 823 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 KATNAL2Q8IYT4 538 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 AZIN2Q96A70 460 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 GGA2Q9UJY4 613 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 ADAMTSL1Q8N6G6 1762 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 PEX11AO75192 247 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 TFE3P19532 575 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 ACO1P21399 889 aaKnown RBP13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 KDELR1P24390 212 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 MLH1P40692 756 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 GRIK3Q13003 919 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 DPYSL3Q14195 570 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 ACSBG2Q5FVE4 666 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 EFCAB12Q6NXP0 572 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 ZNF354CQ86Y25 554 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 RNF135Q8IUD6 432 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 NSL1Q96IY1 281 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 L3MBTL3Q96JM7 780 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 GBP5Q96PP8 586 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 MIPEPQ99797 713 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 PDGFCQ9NRA1 345 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 RABGEF1Q9UJ41 708 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 IQANK1A0A1B0GTG1 560 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 KLHL33A6NCF5 533 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 E9PBE3 544 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 KLHL41O60662 606 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 T-ENOLP0DO92 83 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 KCNA2P16389 499 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 NELFEP18615 380 aaKnown RBP13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 KLRC2P26717 231 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 HOXA7P31268 230 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 CDKN2BP42772 138 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 LAMTOR4Q0VGL1 99 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 PDK4Q16654 411 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 TEKT4Q8WW24 435 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 STRA6Q9BX79 667 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 TEX13BQ9BXU2 312 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 NMRK1Q9NWW6 199 aa13.74□□□□□ -0.21
TNFRSF8-203ENST00000417814 A0A087WZ62 844 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 AVPR1AP37288 418 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 NEK3P51956 506 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 BACE1P56817 501 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 RABGAP1LQ5R372 815 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 RNASEH2BQ5TBB1 312 aaKnown RBP13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 PYROXD2Q8N2H3 581 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 WDTC1Q8N5D0 677 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 CLEC4CQ8WTT0 213 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 FDXACB1Q9BRP7 624 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 RNPEPQ9H4A4 650 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 MINDY3Q9H8M7 445 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 ZFATQ9P243 1243 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 CNTNAP1P78357 1384 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 KLF1Q13351 362 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 ATF7IP2Q5U623 682 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 GSTCDQ8NEC7 633 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 PPP4R1Q8TF05 950 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 SYT15Q9BQS2 421 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 MRPL4Q9BYD3 311 aaKnown RBP13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 BATF3Q9NR55 127 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 CYP39A1Q9NYL5 469 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 GGA3Q9NZ52 723 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 SCN7AQ01118 1682 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 PRR5-ARHGAP8B1AHC4 643 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 AIM2O14862 343 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 DNAJC6O75061 913 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 TPBGLP0DKB5 382 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 UBA1P22314 1058 aaKnown RBP13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 ARHGAP8P85298 464 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 C11orf91Q3C1V1 193 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 SLFN12LQ6IEE8 588 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 ENOSF1Q7L5Y1 443 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 SLC7A6OSQ96CW6 309 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 LGMNQ99538 433 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 SLC5A4Q9NY91 659 aa13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 SMG5Q9UPR3 1016 aaKnown RBP13.73□□□□□ -0.21
TNFRSF8-203ENST00000417814 MAP3K7O43318 606 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 ATP6V1B1P15313 513 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 GARTP22102 1010 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 TBXAS1P24557 533 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 GBE1Q04446 702 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 KLC1Q07866 573 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 RALGPS1Q5JS13 557 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 FAM219BQ5XKK7 198 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 PLEKHA7Q6IQ23 1121 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 IZUMO2Q6UXV1 221 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 RAPH1Q70E73 1250 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 CMC1Q7Z7K0 106 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 ZBTB46Q86UZ6 589 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 GALNT4Q8N4A0 578 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 TEX9Q8N6V9 391 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 FAM172AQ8WUF8 416 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 E2F7Q96AV8 911 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 KIF12Q96FN5 646 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms