RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 BADQ92934 168 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 NGRNQ9NPE2 291 aaKnown RBP17.8■□□□□ 0.44
CALD1-204ENST00000417172 DMGDHQ9UI17 866 aaKnown RBP17.8■□□□□ 0.44
CALD1-204ENST00000417172 ZSCAN5CA6NGD5 496 aaPredicted RBP17.79■□□□□ 0.44
CALD1-204ENST00000417172 RALAP11233 206 aa17.79■□□□□ 0.44
CALD1-204ENST00000417172 ALDH7A1P49419 539 aaKnown RBP17.79■□□□□ 0.44
CALD1-204ENST00000417172 GPR15P49685 360 aa17.79■□□□□ 0.44
CALD1-204ENST00000417172 EPHB4P54760 987 aa17.79■□□□□ 0.44
CALD1-204ENST00000417172 ADCY2Q08462 1091 aa17.79■□□□□ 0.44
CALD1-204ENST00000417172 MRPL58Q14197 206 aaKnown RBP17.79■□□□□ 0.44
CALD1-204ENST00000417172 SIX1Q15475 284 aaPredicted RBP17.79■□□□□ 0.44
CALD1-204ENST00000417172 RAB41Q5JT25 222 aa17.79■□□□□ 0.44
CALD1-204ENST00000417172 SPOUT1Q5T280 376 aaKnown RBP17.79■□□□□ 0.44
CALD1-204ENST00000417172 SDHAF4Q5VUM1 108 aa17.79■□□□□ 0.44
CALD1-204ENST00000417172 C8orf74Q6P047 294 aa17.79■□□□□ 0.44
CALD1-204ENST00000417172 FAM172AQ8WUF8 416 aa17.79■□□□□ 0.44
CALD1-204ENST00000417172 ASNSD1Q9NWL6 643 aa17.79■□□□□ 0.44
CALD1-204ENST00000417172 USP18Q9UMW8 372 aa17.79■□□□□ 0.44
CALD1-204ENST00000417172 YJEFN3A6XGL0 299 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 E7ENQ6 273 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 DPYSL4O14531 572 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 RAD51CO43502 376 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 RNF8O76064 485 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 KRT10P13645 584 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 SDC4P31431 198 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 VSNL1P62760 191 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 IFRD2Q12894 506 aaPredicted RBP17.78■□□□□ 0.44
CALD1-204ENST00000417172 SMC1AQ14683 1233 aaKnown RBP17.78■□□□□ 0.44
CALD1-204ENST00000417172 MFSD7Q6UXD7 560 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 C7orf61Q8IZ16 206 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 PRELID2Q8N945 189 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 SCAMP5Q8TAC9 235 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 SLITRK1Q96PX8 696 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 DMAP1Q9NPF5 467 aaPredicted RBP17.78■□□□□ 0.44
CALD1-204ENST00000417172 IL23AQ9NPF7 189 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 LCMT1Q9UIC8 334 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 MRPL42Q9Y6G3 142 aaKnown RBP17.78■□□□□ 0.44
CALD1-204ENST00000417172 ZBBXA8MT70 800 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 SOAT2O75908 522 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 ZRANB2O95218 330 aaKnown RBP eCLIP17.78■□□□□ 0.44
CALD1-204ENST00000417172 CD48P09326 243 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 RARAP10276 462 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 SYN1P17600 705 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 HDAC4P56524 1084 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 DAOAP59103 153 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 MAPRE1Q15691 268 aaKnown RBP17.78■□□□□ 0.44
CALD1-204ENST00000417172 LRRC38Q5VT99 294 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 ZNF365Q70YC5 407 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 BHLHA9Q7RTU4 235 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 SCN4BQ8IWT1 228 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 DEFB106AQ8N104 65 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 ATAD1Q8NBU5 361 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 EXD1Q8NHP7 514 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 HSPH1Q92598 858 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 FAM118BQ9BPY3 351 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 PRDM10Q9NQV6 1147 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 AMACRQ9UHK6 382 aa17.78■□□□□ 0.44
CALD1-204ENST00000417172 LRRD1A4D1F6 860 aa17.77■□□□□ 0.44
CALD1-204ENST00000417172 SART1O43290 800 aaKnown RBP17.77■□□□□ 0.44
CALD1-204ENST00000417172 TRUB2O95900 331 aaKnown RBP17.77■□□□□ 0.44
CALD1-204ENST00000417172 H2AFXP16104 143 aaPredicted RBP17.77■□□□□ 0.44
CALD1-204ENST00000417172 RPL17P18621 184 aaKnown RBP17.77■□□□□ 0.44
CALD1-204ENST00000417172 GRIK1P39086 918 aa17.77■□□□□ 0.44
CALD1-204ENST00000417172 BTG3Q14201 252 aaPredicted RBP17.77■□□□□ 0.44
CALD1-204ENST00000417172 SYPL2Q5VXT5 272 aa17.77■□□□□ 0.44
CALD1-204ENST00000417172 KAZNQ674X7 775 aa17.77■□□□□ 0.44
CALD1-204ENST00000417172 ZNF280DQ6N043 979 aa17.77■□□□□ 0.44
CALD1-204ENST00000417172 SCYL2Q6P3W7 929 aa17.77■□□□□ 0.44
CALD1-204ENST00000417172 KCNT2Q6UVM3 1135 aa17.77■□□□□ 0.44
CALD1-204ENST00000417172 C4orf50Q6ZRC1 276 aa17.77■□□□□ 0.44
CALD1-204ENST00000417172 IGSF21Q96ID5 467 aa17.77■□□□□ 0.44
CALD1-204ENST00000417172 TBCBQ99426 244 aa17.77■□□□□ 0.44
CALD1-204ENST00000417172 C11orf84Q9BUA3 381 aaPredicted RBP17.77■□□□□ 0.44
CALD1-204ENST00000417172 GPATCH2LQ9NWQ4 482 aa17.77■□□□□ 0.44
CALD1-204ENST00000417172 CXXC1Q9P0U4 656 aaPredicted RBP17.77■□□□□ 0.44
CALD1-204ENST00000417172 C3orf70A6NLC5 250 aaPredicted RBP17.76■□□□□ 0.43
CALD1-204ENST00000417172 C2CD2LO14523 706 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 ADAM12O43184 909 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 HSF2BPO75031 334 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 VNN2O95498 520 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 EFEMP2O95967 443 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 FYNP06241 537 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 GLI1P08151 1106 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 SCNN1AP37088 669 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 DDR2Q16832 855 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 DCAF6Q58WW2 860 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 EFHC1Q5JVL4 640 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 OTUD1Q5VV17 481 aaPredicted RBP17.76■□□□□ 0.43
CALD1-204ENST00000417172 TTC27Q6P3X3 843 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 GSPT2Q8IYD1 628 aaKnown RBP17.76■□□□□ 0.43
CALD1-204ENST00000417172 GPR152Q8TDT2 470 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 ATG4AQ8WYN0 398 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 NAP1L3Q99457 506 aaPredicted RBP17.76■□□□□ 0.43
CALD1-204ENST00000417172 TTPALQ9BTX7 342 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 OSBPL8Q9BZF1 889 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 CRISPLD1Q9H336 500 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.76■□□□□ 0.432e-6■■■□□ 14.8
CALD1-204ENST00000417172 NAALADL1Q9UQQ1 740 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 R3HDM2Q9Y2K5 976 aaKnown RBP17.76■□□□□ 0.43
CALD1-204ENST00000417172 GREB1Q4ZG55 1949 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms