RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 UNC45BQ8IWX7 931 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 SYTL1Q8IYJ3 562 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 UXS1Q8NBZ7 420 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 KRT35Q92764 455 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 PHF21BQ96EK2 531 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 RBBP8Q99708 897 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 HNRNPRO43390 633 aaKnown RBP12.44□□□□□ -0.42
UBR4-205ENST00000417040 SSTR1P30872 391 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 CHI3L1P36222 383 aaPredicted RBP12.44□□□□□ -0.42
UBR4-205ENST00000417040 NFIL3Q16649 462 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 XKR3Q5GH77 459 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 N4BP2L1Q5TBK1 243 aaPredicted RBP12.44□□□□□ -0.42
UBR4-205ENST00000417040 ZBTB46Q86UZ6 589 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 RTKN2Q8IZC4 609 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 OR6Y1Q8NGX8 325 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 KCNH7Q9NS40 1196 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 CALCAP01258 141 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 TPH1P17752 444 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 KLRK1P26718 216 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 NUP107P57740 925 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 CHRNB3Q05901 458 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 C3orf67Q6ZVT6 689 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 FUKQ8N0W3 1084 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 RBM46Q8TBY0 533 aaKnown RBP12.43□□□□□ -0.42
UBR4-205ENST00000417040 SH3TC2Q8TF17 1288 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 UBASH3BQ8TF42 649 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 GPR63Q9BZJ6 419 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 NIF3L1Q9GZT8 377 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 NINJ2Q9NZG7 142 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 GTF3C4Q9UKN8 822 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 WDR27A2RRH5 827 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 ZNF862O60290 1169 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 GJB6O95452 261 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 BCL10O95999 233 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 CPA3P15088 417 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 AGAP9Q5VTM2 703 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 ZNF677Q86XU0 584 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 TTC39CQ8N584 583 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 DPYSL4O14531 572 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 RASSF9O75901 435 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 ALOX12P18054 663 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 NCKAP1LP55160 1127 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 PKNOX1P55347 436 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 RAD51Q06609 339 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 CDC16Q13042 620 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 PTK6Q13882 451 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 GIT2Q14161 759 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 BBS7Q8IWZ6 715 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 ELOA2Q8IYF1 753 aaPredicted RBP12.43□□□□□ -0.42
UBR4-205ENST00000417040 ZMPSTE24O75844 475 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 EPB42P16452 691 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 RFX3P48380 749 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 C21orf59P57076 290 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 ARMCX4Q5H9R4 360 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 EARS2Q5JPH6 523 aaKnown RBP12.43□□□□□ -0.42
UBR4-205ENST00000417040 FASTKD5Q7L8L6 764 aaKnown RBP12.43□□□□□ -0.42
UBR4-205ENST00000417040 STK32AQ8WU08 396 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 CPB2Q96IY4 423 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 TAAR1Q96RJ0 339 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 DDX50Q9BQ39 737 aaKnown RBP12.43□□□□□ -0.42
UBR4-205ENST00000417040 ENDOD1O94919 500 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 MLNP12872 115 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 KCNJ2P63252 427 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 ARHGEF19Q8IW93 802 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 TIPINQ9BVW5 301 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 HDHD2Q9H0R4 259 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 EIF3LQ9Y262 564 aaKnown RBP12.43□□□□□ -0.42
UBR4-205ENST00000417040 SESN1Q9Y6P5 492 aa12.43□□□□□ -0.42
UBR4-205ENST00000417040 A0A087X0B3 334 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 TRIM43BA6NCK2 446 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 SDR42E2A6NKP2 422 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 FAM25AB3EWG3 89 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 FAM25CB3EWG5 89 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 FAM25GB3EWG6 89 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 PTGES3LE9PB15 166 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 ASNA1O43681 348 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 MFN2O95140 757 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 ETS1P14921 441 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 ETS2P15036 469 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 PRIM2P49643 509 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 PTENP60484 403 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 ITGADQ13349 1161 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 POLD3Q15054 466 aaPredicted RBP12.42□□□□□ -0.42
UBR4-205ENST00000417040 CDKAL1Q5VV42 579 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 SLC30A10Q6XR72 485 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 PARP8Q8N3A8 854 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 ZNF75CPQ92670 426 aaPredicted RBP12.42□□□□□ -0.42
UBR4-205ENST00000417040 DCLK3Q9C098 648 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 RAB21Q9UL25 225 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 FAM205AQ6ZU69 1335 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 TM9SF1O15321 606 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 FKBP6O75344 327 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 ACOT1Q86TX2 421 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 FAM172AQ8WUF8 416 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 CFAP99D6REC4 459 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 TRIM24O15164 1050 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 FGFR2P21802 821 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 FDFT1P37268 417 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 RPS7P62081 194 aaKnown RBP12.42□□□□□ -0.42
UBR4-205ENST00000417040 VAC14Q08AM6 782 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms