RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 FARP1Q9Y4F1 1045 aaPredicted RBP10.4□□□□□ -0.74
LINC00494-201ENST00000416742 NDC80O14777 642 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 CA4P22748 312 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 HNRNPH1P31943 449 aaKnown RBP10.4□□□□□ -0.75
LINC00494-201ENST00000416742 PHBP35232 272 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 GSCP56915 257 aaPredicted RBP10.4□□□□□ -0.75
LINC00494-201ENST00000416742 ZNF200P98182 395 aaPredicted RBP10.4□□□□□ -0.75
LINC00494-201ENST00000416742 TAZQ16635 292 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 CA9Q16790 459 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 PPP1R21Q6ZMI0 780 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 PNMA8AQ86V59 439 aaPredicted RBP10.4□□□□□ -0.75
LINC00494-201ENST00000416742 CCDC33Q8N5R6 958 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 NAT8LQ8N9F0 302 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 FBF1Q8TES7 1133 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 FAF2Q96CS3 445 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 RNF157Q96PX1 679 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 FRMD8P1Q9BZ68 369 aaPredicted RBP10.4□□□□□ -0.75
LINC00494-201ENST00000416742 ADAMTS10Q9H324 1103 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 ABCF3Q9NUQ8 709 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 TMEM51Q9NW97 253 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 USP15Q9Y4E8 981 aaPredicted RBP10.4□□□□□ -0.75
LINC00494-201ENST00000416742 NME7Q9Y5B8 376 aa10.4□□□□□ -0.75
LINC00494-201ENST00000416742 KCNN4O15554 427 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 PAPSS1O43252 624 aaPredicted RBP10.39□□□□□ -0.75
LINC00494-201ENST00000416742 CCDC130P13994 396 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 BCAR1P56945 870 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 WDR4P57081 412 aaKnown RBP10.39□□□□□ -0.75
LINC00494-201ENST00000416742 IL9RQ01113 521 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 SLC6A3Q01959 620 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 GRB14Q14449 540 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 ITIH4Q14624 930 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 STILQ15468 1287 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 TRPM8Q7Z2W7 1104 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 ANKRD23Q86SG2 305 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 ATP11CQ8NB49 1132 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 CLEC4CQ8WTT0 213 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 KLF6Q99612 283 aaPredicted RBP10.39□□□□□ -0.75
LINC00494-201ENST00000416742 HAUS2Q9NVX0 235 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 CLUHO75153 1309 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 GOLGA8RI6L899 631 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 SUN1O94901 812 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 MYL3P08590 195 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 ATXN1P54253 815 aaKnown RBP10.39□□□□□ -0.75
LINC00494-201ENST00000416742 BOLA3Q53S33 107 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 SNX27Q96L92 541 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 PTPN18Q99952 460 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 SNRNP25Q9BV90 132 aaKnown RBP10.39□□□□□ -0.75
LINC00494-201ENST00000416742 RNF39Q9H2S5 420 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 KDM4CQ9H3R0 1056 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 GOLGA2P5Q9HBQ8 144 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 RAB6BQ9NRW1 208 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 EURLQ9NYK6 297 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 PLXNA1Q9UIW2 1896 aa10.39□□□□□ -0.75
LINC00494-201ENST00000416742 DESP17661 470 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 TFE3P19532 575 aaPredicted RBP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 IBSPP21815 317 aaPredicted RBP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 LMO2P25791 158 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 FOXN2P32314 431 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 GBP2P32456 591 aaPredicted RBP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 YWHAGP61981 247 aaKnown RBP eCLIP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 NR1H3Q13133 447 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 NOMO1Q15155 1222 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 SEPT7Q16181 437 aaKnown RBP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 SPATA21Q7Z572 469 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 MAGEB18Q96M61 343 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 PARK7Q99497 189 aaKnown RBP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 PITPNM3Q9BZ71 974 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 MAGEB5Q9BZ81 275 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 SNX25Q9H3E2 840 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 DHX35Q9H5Z1 703 aaKnown RBP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 PLEKHA5Q9HAU0 1116 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 SLC40A1Q9NP59 571 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 PSMC3IPQ9P2W1 217 aaPredicted RBP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 WDR91A4D1P6 747 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 APOL1O14791 398 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 AVILO75366 819 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 GPR32O75388 356 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 STAU1O95793 577 aaKnown RBP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 RBL1P28749 1068 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 STIP1P31948 543 aaKnown RBP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 GNL1P36915 607 aaPredicted RBP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 MSH2P43246 934 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 GEMIN4P57678 1058 aaKnown RBP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 BEX3Q00994 111 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 DNAJC3Q13217 504 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 SOWAHAQ2M3V2 549 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 ZNF618Q5T7W0 954 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 HHATQ5VTY9 493 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 C9orf57Q5W0N0 161 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 OLFML1Q6UWY5 402 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 CYP4V2Q6ZWL3 525 aaPredicted RBP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 CNPY4Q8N129 248 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 SGSM3Q96HU1 749 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 PCDH18Q9HCL0 1135 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 RABGEF1Q9UJ41 708 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 ACTL7BQ9Y614 415 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 TREHO43280 583 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 GABBR2O75899 941 aa10.38□□□□□ -0.75
LINC00494-201ENST00000416742 CELF2O95319 508 aaKnown RBP10.38□□□□□ -0.75
LINC00494-201ENST00000416742 ZBED1O96006 694 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms