RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 PTPN9P43378 593 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 CACNA2D1P54289 1103 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 BCAR1P56945 870 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 MRPS5P82675 430 aaKnown RBP18.92■□□□□ 0.62
RTN4R-202ENST00000416372 KCNT1Q5JUK3 1230 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 KAZNQ674X7 775 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 TTC27Q6P3X3 843 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 CCDC137Q6PK04 289 aaKnown RBP18.92■□□□□ 0.62
RTN4R-202ENST00000416372 ANKS1BQ7Z6G8 1248 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 LRRTM3Q86VH5 581 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 GSPT2Q8IYD1 628 aaKnown RBP18.92■□□□□ 0.62
RTN4R-202ENST00000416372 C12orf50Q8NA57 414 aaPredicted RBP18.92■□□□□ 0.62
RTN4R-202ENST00000416372 ZMIZ2Q8NF64 920 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 FAM172AQ8WUF8 416 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 C1orf54Q8WWF1 131 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 IFT81Q8WYA0 676 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 FAM149B1Q96BN6 582 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 NCAPGQ9BPX3 1015 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 UBXN6Q9BZV1 441 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 MICAL3Q7RTP6 2002 aa18.92■□□□□ 0.62
RTN4R-202ENST00000416372 FAM187AA6NFU0 413 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 HSF2BPO75031 334 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 FBXO21O94952 628 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 UPP2O95045 317 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 OAZ2O95190 189 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 KRT10P13645 584 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 BDNFP23560 247 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 SLC11A1P49279 550 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 CTCFP49711 727 aaPredicted RBP18.91■□□□□ 0.62
RTN4R-202ENST00000416372 NDUFV1P49821 464 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 RABGGTBP53611 331 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 ADCY1Q08828 1119 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 KLF1Q13351 362 aaPredicted RBP18.91■□□□□ 0.62
RTN4R-202ENST00000416372 RAB6CQ53S08 254 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 TFDP3Q5H9I0 405 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 COL13A1Q5TAT6 717 aaPredicted RBP18.91■□□□□ 0.62
RTN4R-202ENST00000416372 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.91■□□□□ 0.62
RTN4R-202ENST00000416372 CASKIN2Q8WXE0 1202 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 NDRG1Q92597 394 aaKnown RBP18.91■□□□□ 0.62
RTN4R-202ENST00000416372 HSPH1Q92598 858 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 RAB6CQ9H0N0 254 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 LRRC19Q9H756 370 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 TMEM30AQ9NV96 361 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.91■□□□□ 0.62
RTN4R-202ENST00000416372 HCSTQ9UBK5 93 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 PCYOX1Q9UHG3 505 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 RASAL2Q9UJF2 1139 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 UTP11Q9Y3A2 253 aaKnown RBP18.91■□□□□ 0.62
RTN4R-202ENST00000416372 SYN3O14994 580 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 TJP3O95049 919 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 PTPN7P35236 360 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 CDKN2BP42772 138 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 FNTAP49354 379 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 SCYL2Q6P3W7 929 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 C4orf50Q6ZRC1 276 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 NECAB2Q7Z6G3 386 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 SPATA2LQ8IUW3 424 aaPredicted RBP18.91■□□□□ 0.62
RTN4R-202ENST00000416372 CCDC105Q8IYK2 499 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 KCTD6Q8NC69 237 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 PEBP4Q96S96 227 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 TMEM175Q9BSA9 504 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 TRIM51Q9BSJ1 452 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 DDX23Q9BUQ8 820 aaKnown RBP18.91■□□□□ 0.62
RTN4R-202ENST00000416372 TMEM106CQ9BVX2 250 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 ULBP1Q9BZM6 244 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 RAB17Q9H0T7 212 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 CSNK1G1Q9HCP0 422 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 HOMER3Q9NSC5 361 aa18.91■□□□□ 0.62
RTN4R-202ENST00000416372 hCG_1818297A0A087WSY0 165 aa18.9■□□□□ 0.62
RTN4R-202ENST00000416372 C3orf70A6NLC5 250 aaPredicted RBP18.9■□□□□ 0.62
RTN4R-202ENST00000416372 KDELR1P24390 212 aa18.9■□□□□ 0.62
RTN4R-202ENST00000416372 CARSP49589 748 aaKnown RBP18.9■□□□□ 0.62
RTN4R-202ENST00000416372 YWHAZP63104 245 aaKnown RBP18.9■□□□□ 0.62
RTN4R-202ENST00000416372 SNX1Q13596 522 aa18.9■□□□□ 0.62
RTN4R-202ENST00000416372 FAM171A1Q5VUB5 890 aa18.9■□□□□ 0.62
RTN4R-202ENST00000416372 CEP57Q86XR8 500 aa18.9■□□□□ 0.62
RTN4R-202ENST00000416372 JAMLQ86YT9 394 aa18.9■□□□□ 0.62
RTN4R-202ENST00000416372 DCP1BQ8IZD4 617 aaKnown RBP18.9■□□□□ 0.62
RTN4R-202ENST00000416372 LRRC43Q8N309 656 aa18.9■□□□□ 0.62
RTN4R-202ENST00000416372 CMASQ8NFW8 434 aaPredicted RBP18.9■□□□□ 0.62
RTN4R-202ENST00000416372 ATG4AQ8WYN0 398 aa18.9■□□□□ 0.62
RTN4R-202ENST00000416372 DCLK3Q9C098 648 aa18.9■□□□□ 0.62
RTN4R-202ENST00000416372 DMAP1Q9NPF5 467 aaPredicted RBP18.9■□□□□ 0.62
RTN4R-202ENST00000416372 PRDM5Q9NQX1 630 aaPredicted RBP18.9■□□□□ 0.62
RTN4R-202ENST00000416372 R3HDM2Q9Y2K5 976 aaKnown RBP18.9■□□□□ 0.62
RTN4R-202ENST00000416372 FNDC1Q4ZHG4 1894 aaPredicted RBP18.9■□□□□ 0.62
RTN4R-202ENST00000416372 HHLA1C9JL84 531 aa18.89■□□□□ 0.61
RTN4R-202ENST00000416372 DAB1O75553 588 aa18.89■□□□□ 0.61
RTN4R-202ENST00000416372 MATKP42679 507 aa18.89■□□□□ 0.61
RTN4R-202ENST00000416372 PTGIRP43119 386 aa18.89■□□□□ 0.61
RTN4R-202ENST00000416372 TNNT3P45378 269 aaPredicted RBP18.89■□□□□ 0.61
RTN4R-202ENST00000416372 KCNJ1P48048 391 aa18.89■□□□□ 0.61
RTN4R-202ENST00000416372 RAB41Q5JT25 222 aa18.89■□□□□ 0.61
RTN4R-202ENST00000416372 VARS2Q5ST30 1063 aaKnown RBP18.89■□□□□ 0.61
RTN4R-202ENST00000416372 GPRIN1Q7Z2K8 1008 aa18.89■□□□□ 0.61
RTN4R-202ENST00000416372 DEFB106AQ8N104 65 aa18.89■□□□□ 0.61
RTN4R-202ENST00000416372 ZCWPW1Q9H0M4 648 aa18.89■□□□□ 0.61
RTN4R-202ENST00000416372 CNGB3Q9NQW8 809 aa18.89■□□□□ 0.61
RTN4R-202ENST00000416372 CHST7Q9NS84 486 aa18.89■□□□□ 0.61
RTN4R-202ENST00000416372 MARCH5Q9NX47 278 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms