RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CSNK1G1Q9HCP0 422 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 KRT82Q9NSB4 513 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 SMPD4Q9NXE4 827 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 DLL3Q9NYJ7 618 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 TBC1D14Q9P2M4 693 aa18.64■□□□□ 0.57
PDLIM2-208ENST00000416159 FAM92AA1XBS5 289 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 TRIM49P0CI25 452 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 TRIM49CP0CI26 452 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 CCDC130P13994 396 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 HOXC13P31276 330 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 GTF2H1P32780 548 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 TUBP50607 506 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 MCCD1P59942 119 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 PPP3CAQ08209 521 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 EDRF1Q3B7T1 1238 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 ZCWPW2Q504Y3 356 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 ZMIZ2Q8NF64 920 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 RPLP0P6Q8NHW5 317 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 SLC2A14Q8TDB8 520 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 ACDQ96AP0 544 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 DNAI2Q9GZS0 605 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 FBXO44Q9H4M3 255 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 TMEM8AQ9HCN3 771 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 CFAP97Q9P2B7 532 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 HMGXB4Q9UGU5 601 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 CEP250Q9BV73 2442 aa18.63■□□□□ 0.57
PDLIM2-208ENST00000416159 RALGAPA1Q6GYQ0 2036 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 E2F8A0AVK6 867 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 GOLGA6L4A6NEF3 574 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 COCHO43405 550 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 ZDHHC11BP0C7U3 371 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 OPRD1P41143 372 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 MAP3K7CLP57077 242 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 NUCB2P80303 420 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 SPEM2Q0P670 501 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 INCA1Q0VD86 236 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 ORC1Q13415 861 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 DHCR24Q15392 516 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 SYT13Q7L8C5 426 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 C12orf29Q8N999 325 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 TAS1R2Q8TE23 839 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 GAB3Q8WWW8 586 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 EZH1Q92800 747 aaPredicted RBP18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 HNRNPABQ99729 332 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 NT5C1AQ9BXI3 368 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 APOBEC3GQ9HC16 384 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 PARD6AQ9NPB6 346 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 FAM49BQ9NUQ9 324 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 RMND1Q9NWS8 449 aa18.62■□□□□ 0.57
PDLIM2-208ENST00000416159 SPAG17Q6Q759 2223 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 SDK1Q7Z5N4 2213 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 CETN3O15182 167 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 BEST1O76090 585 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 CYP17A1P05093 508 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 FAM200BP0CF97 657 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 ADORA2BP29275 332 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 PXNP49023 591 aaPredicted RBP18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 KRT39Q6A163 491 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 FAM160A2Q8N612 972 aaPredicted RBP18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 OTUB2Q96DC9 234 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 CYFIP2Q96F07 1278 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 FAXDC2Q96IV6 333 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 NIF3L1Q9GZT8 377 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 MMRN2Q9H8L6 949 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 GMIPQ9P107 970 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 MYOFQ9NZM1 2061 aa18.61■□□□□ 0.57
PDLIM2-208ENST00000416159 AXIN1O15169 862 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 STX10O60499 249 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 RPP40O75818 363 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 ADH1CP00326 375 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 EPB41P11171 864 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 EIF2DP41214 584 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 PNOCQ13519 176 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 DMC1Q14565 340 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 GAB4Q2WGN9 574 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 RHBDF2Q6PJF5 856 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 CACNA2D4Q7Z3S7 1137 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 FMR1NBQ8N0W7 255 aaPredicted RBP18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 USP33Q8TEY7 942 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 LOXL4Q96JB6 756 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 GSDMAQ96QA5 445 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 TWNKQ96RR1 684 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 NACA2Q9H009 215 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 CCSER2Q9H7U1 834 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 TLR8Q9NR97 1041 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 SH3BP1Q9Y3L3 701 aa18.6■□□□□ 0.57
PDLIM2-208ENST00000416159 K7EQS6 105 aa18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 FOXD2O60548 495 aaPredicted RBP18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 CILPO75339 1184 aa18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 CCDC192P0DO97 292 aa18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 CSRP2Q16527 193 aa18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 COBLL1Q53SF7 1204 aa18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 CLEC20AQ6ZU45 233 aa18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 SMYD4Q8IYR2 804 aaPredicted RBP18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 TTC39CQ8N584 583 aa18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 ZFRQ96KR1 1074 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 HHIPQ96QV1 700 aa18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 PNKPQ96T60 521 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms