RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 SYT12Q8IV01 421 aa7.75□□□□□ -1.17
LINC00343-202ENST00000415294 SMAP1Q8IYB5 467 aaPredicted RBP7.75□□□□□ -1.17
LINC00343-202ENST00000415294 CCDC150Q8NCX0 1101 aa7.75□□□□□ -1.17
LINC00343-202ENST00000415294 LTV1Q96GA3 475 aaPredicted RBP7.75□□□□□ -1.17
LINC00343-202ENST00000415294 TEPSINQ96N21 525 aa7.75□□□□□ -1.17
LINC00343-202ENST00000415294 NECTIN3Q9NQS3 549 aa7.75□□□□□ -1.17
LINC00343-202ENST00000415294 CAPN11Q9UMQ6 739 aa7.75□□□□□ -1.17
LINC00343-202ENST00000415294 SHOC2Q9UQ13 582 aa7.75□□□□□ -1.17
LINC00343-202ENST00000415294 ATP11BQ9Y2G3 1177 aa7.75□□□□□ -1.17
LINC00343-202ENST00000415294 LTBP1Q14766 1721 aa7.75□□□□□ -1.17
LINC00343-202ENST00000415294 UBR3Q6ZT12 1888 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 KDM6AO15550 1401 aaPredicted RBP7.74□□□□□ -1.17
LINC00343-202ENST00000415294 SLIT3O75094 1523 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 DOT1LQ8TEK3 1739 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 POLRMTO00411 1230 aaKnown RBP7.74□□□□□ -1.17
LINC00343-202ENST00000415294 GPR42O15529 346 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 ZSCAN22P10073 491 aaPredicted RBP7.74□□□□□ -1.17
LINC00343-202ENST00000415294 BMP7P18075 431 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 ALDH9A1P49189 494 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 COPAP53621 1224 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 GRM1Q13255 1194 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 SLC29A2Q14542 456 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 DEFB115Q30KQ5 88 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 C1QL3Q5VWW1 255 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 MAMDC4Q6UXC1 1216 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 CPXCR1Q8N123 301 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 FEZF2Q8TBJ5 459 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 CCT6BQ92526 530 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 SCLT1Q96NL6 688 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 TRIB1Q96RU8 372 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 MNTQ99583 582 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 MESP1Q9BRJ9 268 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 ISCA1Q9BUE6 129 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 FAM83DQ9H4H8 585 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 ETAA1Q9NY74 926 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 HDAC9Q9UKV0 1011 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 CDYLQ9Y232 598 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.74□□□□□ -1.17
LINC00343-202ENST00000415294 ROCK1Q13464 1354 aa7.74□□□□□ -1.17
LINC00343-202ENST00000415294 CPSF1Q10570 1443 aaKnown RBP7.73□□□□□ -1.17
LINC00343-202ENST00000415294 TIAM2Q8IVF5 1701 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 ANKRD36BQ8N2N9 1353 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 CCDC195A0A1B0GUA6 201 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 TRIM24O15164 1050 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 CSTBP04080 98 aaKnown RBP7.73□□□□□ -1.17
LINC00343-202ENST00000415294 A1BGP04217 495 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 MMP10P09238 476 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 ACVR2AP27037 513 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 CCT5P48643 541 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 MAN2A2P49641 1150 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 NHLH2Q02577 135 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 MGAT5BQ3V5L5 792 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 CCDC38Q502W7 563 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 METRNLQ641Q3 311 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 TAPT1Q6NXT6 567 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 GDF15Q99988 308 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 TLR10Q9BXR5 811 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 GPR87Q9BY21 358 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 XYLT2Q9H1B5 865 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 TMEM8AQ9HCN3 771 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 SLC39A10Q9ULF5 831 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 MAN2B2Q9Y2E5 1009 aa7.73□□□□□ -1.17
LINC00343-202ENST00000415294 CCDC88AQ3V6T2 1871 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 SZT2Q5T011 3432 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 KCNQ3O43525 872 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 TLR5O60602 858 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 PRSS23O95084 383 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 LRPAP1P30533 357 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 CHKAP35790 457 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 PPM1FP49593 454 aaPredicted RBP7.72□□□□□ -1.17
LINC00343-202ENST00000415294 ARHGEF7Q14155 803 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 TSHZ3Q63HK5 1081 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 ARL6IP4Q66PJ3 421 aaKnown RBP7.72□□□□□ -1.17
LINC00343-202ENST00000415294 SPTY2D1Q68D10 685 aaPredicted RBP7.72□□□□□ -1.17
LINC00343-202ENST00000415294 FBXO38Q6PIJ6 1188 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 FOXR2Q6PJQ5 311 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 OR56A1Q8NGH5 318 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 POC1BQ8TC44 478 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 EDAQ92838 391 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 MARS2Q96GW9 593 aaKnown RBP7.72□□□□□ -1.17
LINC00343-202ENST00000415294 PHACTR3Q96KR7 559 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 SNX27Q96L92 541 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 ZCCHC4Q9H5U6 513 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 HEYLQ9NQ87 328 aaPredicted RBP7.72□□□□□ -1.17
LINC00343-202ENST00000415294 MID2Q9UJV3 735 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 C4BP0C0L5 1744 aa7.72□□□□□ -1.17
LINC00343-202ENST00000415294 AQP7P3A6NL99 342 aa7.71□□□□□ -1.18
LINC00343-202ENST00000415294 TMEM233B4DJY2 109 aa7.71□□□□□ -1.18
LINC00343-202ENST00000415294 PIP5K1CO60331 668 aa7.71□□□□□ -1.18
LINC00343-202ENST00000415294 RECQL4O94761 1208 aa7.71□□□□□ -1.18
LINC00343-202ENST00000415294 FGAP02671 866 aa7.71□□□□□ -1.18
LINC00343-202ENST00000415294 BTF3P20290 206 aaKnown RBP7.71□□□□□ -1.18
LINC00343-202ENST00000415294 CPT1AP50416 773 aa7.71□□□□□ -1.18
LINC00343-202ENST00000415294 LOXL3P58215 753 aa7.71□□□□□ -1.18
LINC00343-202ENST00000415294 TUBB8Q3ZCM7 444 aa7.71□□□□□ -1.18
LINC00343-202ENST00000415294 ZACNQ401N2 412 aa7.71□□□□□ -1.18
LINC00343-202ENST00000415294 PLA1AQ53H76 456 aa7.71□□□□□ -1.18
LINC00343-202ENST00000415294 CCDC174Q6PII3 467 aa7.71□□□□□ -1.18
LINC00343-202ENST00000415294 LAYNQ6UX15 382 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms