RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 CSF1P09603 554 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 HOXA10P31260 410 aaPredicted RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 ATICP31939 592 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 PIK3CAP42336 1068 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 HARS2P49590 506 aaKnown RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 ZNF132P52740 706 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 ZNF135P52742 658 aaPredicted RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 ADARP55265 1226 aaKnown RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 ARL4CP56559 192 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 PRR5P85299 388 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 MAPK7Q13164 816 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 RAB3GAP1Q15042 981 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 NUGGCQ68CJ6 796 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 INTS5Q6P9B9 1019 aaKnown RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 ZNF449Q6P9G9 518 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 RNF111Q6ZNA4 994 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 KRT74Q7RTS7 529 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 NME9Q86XW9 330 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 GALNT15Q8N3T1 639 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 CALML6Q8TD86 181 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 FATE1Q969F0 183 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 SAMD11Q96NU1 681 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 USP44Q9H0E7 712 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 ADARB2Q9NS39 739 aaKnown RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 HERC5Q9UII4 1024 aaKnown RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 ABT1Q9ULW3 272 aaKnown RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 TRIM64CA6NLI5 447 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 PTP4A3O75365 173 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 DDNO94850 711 aaPredicted RBP2.84□□□□□ -1.96
MCF2-204ENST00000414978 KIF20AO95235 890 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 HNRNPCP07910 306 aaKnown RBP eCLIP2.84□□□□□ -1.96
MCF2-204ENST00000414978 ALADP13716 330 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 COL8A1P27658 744 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 CHRNA5P30532 468 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 GJA4P35212 333 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 CASP6P55212 293 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 IL13RA1P78552 427 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 ZNF200P98182 395 aaPredicted RBP2.84□□□□□ -1.96
MCF2-204ENST00000414978 KRT17Q04695 432 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 MTA1Q13330 715 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 ADAM15Q13444 863 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 AFMIDQ63HM1 303 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 ZDHHC24Q6UX98 284 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 C4orf50Q6ZRC1 276 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 FAM214BQ7L5A3 538 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 XYLT1Q86Y38 959 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 RSAD2Q8WXG1 361 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 EZH1Q92800 747 aaPredicted RBP2.84□□□□□ -1.96
MCF2-204ENST00000414978 GATA6Q92908 595 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 MCRS1Q96EZ8 462 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 UIMC1Q96RL1 719 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 MAGEB5Q9BZ81 275 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 SLC25A18Q9H1K4 315 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 C2orf40Q9H1Z8 148 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 GRPEL1Q9HAV7 217 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 LPAR3Q9UBY5 353 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 COG5Q9UP83 839 aa2.84□□□□□ -1.96
MCF2-204ENST00000414978 DDX60LQ5H9U9 1706 aaKnown RBP2.84□□□□□ -1.96
MCF2-204ENST00000414978 RGS10O43665 173 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 RPLP2P05387 115 aaKnown RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 RARBP10826 455 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 GABRB3P28472 473 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 CASRP41180 1078 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 CHRNA4P43681 627 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 TRPC3Q13507 836 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 MED22Q15528 200 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 TBCCQ15814 346 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 VASNQ6EMK4 673 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 RGMBQ6NW40 437 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 BTNL9Q6UXG8 535 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 CRELD2Q6UXH1 353 aaPredicted RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 LIPIQ6XZB0 460 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 R3HCC1LQ7Z5L2 792 aaKnown RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 BRSK2Q8IWQ3 736 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 TMEM130Q8N3G9 435 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 OTUD6BQ8N6M0 293 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 DCBLD1Q8N8Z6 715 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 TMEM171Q8WVE6 324 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 MASTLQ96GX5 879 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 RPL10LQ96L21 214 aaKnown RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 PAIP1Q9H074 479 aaKnown RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 UNC45AQ9H3U1 944 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 KCNK12Q9HB15 430 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 TMOD3Q9NYL9 352 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 ZC3H7BQ9UGR2 993 aaKnown RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 ZNF215Q9UL58 517 aaPredicted RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 WASF3Q9UPY6 502 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 B4DLN1 442 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 F2RL2O00254 374 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 FOXN3O00409 490 aaPredicted RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 ITGA10O75578 1167 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 ACTL6BO94805 426 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 STARD3NLO95772 234 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 ZGLP1P0C6A0 271 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 FSTP19883 344 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 CD72P21854 359 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 DPP6P42658 865 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 CDC42EP1Q00587 391 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 SMAD4Q13485 552 aaKnown RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 PLCL1Q15111 1095 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms