RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ZBP1Q9H171 429 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 AVENQ9NQS1 362 aaPredicted RBP16.32■□□□□ 0.2
SHMT2-202ENST00000414700 SLC27A5Q9Y2P5 690 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 XIRP2A4UGR9 3374 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 HHLA1C9JL84 531 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 BUB1BO60566 1050 aaPredicted RBP16.31■□□□□ 0.2
SHMT2-202ENST00000414700 PALMO75781 387 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 URODP06132 367 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 RPL34P49207 117 aaKnown RBP16.31■□□□□ 0.2
SHMT2-202ENST00000414700 ERVFC1P60507 584 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 ADIGQ0VDE8 80 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 TAF5Q15542 800 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 CFAP221Q4G0U5 840 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 LIN9Q5TKA1 542 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 SDHAF4Q5VUM1 108 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 C4orf50Q6ZRC1 276 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 RHOT2Q8IXI1 618 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 RNF10Q8N5U6 811 aaKnown RBP16.31■□□□□ 0.2
SHMT2-202ENST00000414700 TRIM11Q96F44 468 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 PBX4Q9BYU1 374 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 HYOU1Q9Y4L1 999 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 PCDHGC5Q9Y5F6 944 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 BACE2Q9Y5Z0 518 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 PSEN1P49768 467 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 SLC8A3P57103 927 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 NFE2Q16621 373 aaPredicted RBP16.31■□□□□ 0.2
SHMT2-202ENST00000414700 DDR2Q16832 855 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 DNAJC21Q5F1R6 531 aaKnown RBP16.31■□□□□ 0.2
SHMT2-202ENST00000414700 PPP1R15BQ5SWA1 713 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 PPP1R2P3Q6NXS1 205 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 C3orf20Q8ND61 904 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 MCEEQ96PE7 176 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 FAM204AQ9H8W3 233 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 CERS4Q9HA82 394 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 STRIP2Q9ULQ0 834 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 PCDHB5Q9Y5E4 795 aa16.31■□□□□ 0.2
SHMT2-202ENST00000414700 ZNF638Q14966 1978 aaKnown RBP16.3■□□□□ 0.2
SHMT2-202ENST00000414700 C5orf42Q9H799 3197 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 CARNS1A5YM72 827 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 ENC1O14682 589 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 LILRB3O75022 631 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 GRAP2O75791 330 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 CA8P35219 290 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 GRIK1P39086 918 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 VSNL1P62760 191 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 TAP1Q03518 808 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 ADCY1Q08828 1119 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 DUSP4Q13115 394 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 OR6B2Q6IFH4 312 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 DNAJC24Q6P3W2 148 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 OLFML1Q6UWY5 402 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 SCN4BQ8IWT1 228 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 EMC1Q8N766 993 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 LRRC57Q8N9N7 239 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 JOSD2Q8TAC2 188 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 SPPL3Q8TCT6 385 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 GPR152Q8TDT2 470 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 MCRS1Q96EZ8 462 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 HSFY1Q96LI6 401 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 VIPAS39Q9H9C1 493 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 DMAP1Q9NPF5 467 aaPredicted RBP16.3■□□□□ 0.2
SHMT2-202ENST00000414700 METTL5Q9NRN9 209 aaKnown RBP16.3■□□□□ 0.2
SHMT2-202ENST00000414700 MRPL17Q9NRX2 175 aaKnown RBP16.3■□□□□ 0.2
SHMT2-202ENST00000414700 PARVAQ9NVD7 372 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 UVRAGQ9P2Y5 699 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 ANAPC7Q9UJX3 599 aa16.3■□□□□ 0.2
SHMT2-202ENST00000414700 TEX28O15482 410 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 FTCDO95954 541 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 CTSAP10619 480 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 RFC1P35251 1148 aaPredicted RBP16.29■□□□□ 0.2
SHMT2-202ENST00000414700 TKTL1P51854 596 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 CAMK1Q14012 370 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
SHMT2-202ENST00000414700 TCEAL1Q15170 157 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 WHAMMP3Q1A5X7 153 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 FAM102AQ5T9C2 384 aaPredicted RBP16.29■□□□□ 0.2
SHMT2-202ENST00000414700 DAB2IPQ5VWQ8 1189 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 TMC7Q7Z402 723 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 SCAMP5Q8TAC9 235 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 POF1BQ8WVV4 589 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 KHSRPQ92945 711 aaKnown RBP eCLIP16.29■□□□□ 0.2
SHMT2-202ENST00000414700 FUBP3Q96I24 572 aaKnown RBP eCLIP16.29■□□□□ 0.2
SHMT2-202ENST00000414700 TCF25Q9BQ70 676 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 PACSIN2Q9UNF0 486 aaPredicted RBP16.29■□□□□ 0.2
SHMT2-202ENST00000414700 PCDHA11Q9Y5I1 949 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 GREB1Q4ZG55 1949 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 C5orf67F2Z3F1 127 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 GRM6O15303 877 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 MTA2O94776 668 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 HADHBP55084 474 aaKnown RBP16.29■□□□□ 0.2
SHMT2-202ENST00000414700 GSCP56915 257 aaPredicted RBP16.29■□□□□ 0.2
SHMT2-202ENST00000414700 RNASE9P60153 205 aaKnown RBP16.29■□□□□ 0.2
SHMT2-202ENST00000414700 OGDHQ02218 1023 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 ZNF252P-AS1Q0IIN9 211 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 MESDQ14696 234 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 RAB41Q5JT25 222 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 TRNP1Q6NT89 227 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 DAAM2Q86T65 1068 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 TRIM58Q8NG06 486 aa16.29■□□□□ 0.2
SHMT2-202ENST00000414700 KCTD13Q8WZ19 329 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms