RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CLCQ05315 142 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ACTN3Q08043 901 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 NCBP1Q09161 790 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 C17orf67Q0P5P2 114 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 KCNAB2Q13303 367 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 SEMA5AQ13591 1074 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 HNRNPDQ14103 355 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 GALNT3Q14435 633 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 SPCS2Q15005 226 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 STK38Q15208 465 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ADIPOQQ15848 244 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 CNGA2Q16280 664 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ATP2B3Q16720 1220 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 HADHQ16836 314 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 PFKFB3Q16875 520 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 INSCQ1MX18 579 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 USH1GQ495M9 461 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 USP39Q53GS9 565 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 C1orf141Q5JVX7 400 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 CCDC62Q6P9F0 684 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 AAGABQ6PD74 315 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 PAPD4Q6PIY7 484 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ZNF704Q6ZNC4 412 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 NLRC3Q7RTR2 1065 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 PRPF39Q86UA1 669 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 FAM124AQ86V42 546 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 LRRTM4Q86VH4 590 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 MFN1Q8IWA4 741 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 REXO1Q8N1G1 1221 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 DNAAF3Q8N9W5 541 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 SIMC1Q8NDZ2 872 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 OR6S1Q8NH40 331 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 SLC22A8Q8TCC7 542 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 SPPL3Q8TCT6 385 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 PIGOQ8TEQ8 1089 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 HERVK_113Q902F9 699 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 KRT35Q92764 455 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 KAT2BQ92831 832 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 KIFAP3Q92845 792 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 KISS1RQ969F8 398 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 KIAA1191Q96A73 305 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 DACT3Q96B18 629 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 SHISA4Q96DD7 197 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 MSANTD3Q96H12 275 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 SNX27Q96L92 541 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 AK8Q96MA6 479 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 MNTQ99583 582 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 TTC1Q99614 292 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 CCT7Q99832 543 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 SPXQ9BT56 116 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ASPNQ9BXN1 380 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 HDAC8Q9BY41 377 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ADNPQ9H2P0 1102 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 THAP9Q9H5L6 903 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ANTXR1Q9H6X2 564 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 GORASP2Q9H8Y8 452 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 CRTAC1Q9NQ79 661 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 HAUS2Q9NVX0 235 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 UBP1Q9NZI7 540 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 EHD2Q9NZN4 543 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 HMG20BQ9P0W2 317 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 HESX1Q9UBX0 185 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 RCOR1Q9UKL0 485 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 CNOT11Q9UKZ1 510 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 APOBEC2Q9Y235 224 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ASB3Q9Y575 518 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ADAMTS20P59510 1910 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 A0A1B0GWJ7 208 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 ZC3H12DA2A288 527 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 CCDC78A2IDD5 438 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 LRRD1A4D1F6 860 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 PMS2P1A4D2B8 440 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 GPR89AB7ZAQ6 455 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 M0R2C6 588 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 OVOL3O00110 214 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 MYO1CO00159 1063 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 UBE2CO00762 179 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 NEMP1O14524 444 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 DAPK3O43293 454 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 ACSL4O60488 711 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 SYNCRIPO60506 623 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 CLN5O75503 358 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 PPM1BO75688 479 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 FLOT1O75955 427 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 PRKD3O94806 890 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 SLU7O95391 586 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 PGM3O95394 542 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 DLDP09622 509 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 GPR89BP0CG08 455 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 TMIGD3P0DMS9 266 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 NR2F1P10589 423 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 CKMT1AP12532 417 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 IFNAR1P17181 557 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 EEF1DP29692 281 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 TTKP33981 857 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 RFC1P35251 1148 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 CCT6AP40227 531 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 RGS2P41220 211 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 WNT5AP41221 380 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 IARSP41252 1262 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms