RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 TRAF1Q13077 416 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 VWA5B1Q5TIE3 1220 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 RASIP1Q5U651 963 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 DRICH1Q6PGQ1 229 aaPredicted RBP15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 DEPTORQ8TB45 409 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 FAF2Q96CS3 445 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 GBP5Q96PP8 586 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 PHACTR1Q9C0D0 580 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 UBR3Q6ZT12 1888 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 H7C0C1 242 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 KRT19P08727 400 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 DHRS4L1P0CG22 281 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 CSH1P0DML2 217 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 CSH2P0DML3 217 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 ATP5OP48047 213 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 SNRPFP62306 86 aaKnown RBP15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 KRT76Q01546 638 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 DENND5BQ6ZUT9 1274 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 GJD4Q96KN9 370 aaPredicted RBP15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 PDLIM7Q9NR12 457 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 OR6B1O95007 311 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 MIPP30301 263 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 ROR2Q01974 943 aaKnown RBP15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 PRAMEF18Q5VWM3 479 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 CIAPIN1Q6FI81 312 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 EGFL6Q8IUX8 553 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 LARGE2Q8N3Y3 721 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 UBA3Q8TBC4 463 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 CCDC110Q8TBZ0 833 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 FAM151AQ8WW52 585 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 SLC44A1Q8WWI5 657 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 CNTN3Q9P232 1028 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 MAD1L1Q9Y6D9 718 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 NFASCO94856 1347 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 LOC100653049A0A140TA62 436 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 TOM1L1O75674 476 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 KRT34O76011 436 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 EGFRP00533 1210 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 ERBB2P04626 1255 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 SRGAP2CP0DJJ0 459 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 TRIM72Q6ZMU5 477 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 THNSL1Q8IYQ7 743 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 TMEM35BQ8NCS4 154 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 PPP1R16BQ96T49 567 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 IMPG2Q9BZV3 1241 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 APRTP07741 180 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 KCNA2P16389 499 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 GSTT1P30711 240 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 SMC1BQ8NDV3 1235 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 VCPIP1Q96JH7 1222 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 TWNKQ96RR1 684 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 MRIQ9BWK5 157 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 SLC38A10Q9HBR0 1119 aa15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 ZNF277Q9NRM2 450 aaPredicted RBP15.19■□□□□ 0.02
SEMA3F-202ENST00000413852 IQANK1A0A1B0GTG1 560 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 A6NJR5 290 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 CAPN14A8MX76 684 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 DGAT1O75907 488 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 ATXN3P54252 364 aaPredicted RBP15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 MCL1Q07820 350 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 CDC16Q13042 620 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 SFT2D3Q587I9 215 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 MCF2L2Q86YR7 1114 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 TMEM192Q8IY95 271 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 AGR3Q8TD06 166 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 ANKRD27Q96NW4 1050 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 CGRRF1Q99675 332 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 RNF146Q9NTX7 359 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 PCDHGB4Q9UN71 923 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 PLA2G4CQ9UP65 541 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 PCDHGB5Q9Y5G0 923 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 MYOCOSA0A1B0GUC4 107 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 KCNA4P22459 653 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 ADORA2AP29274 412 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 MSX2P35548 267 aaPredicted RBP15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 CLDN10P78369 228 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 PPP6R3Q5H9R7 873 aaPredicted RBP15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 TCHHL1Q5QJ38 904 aaPredicted RBP15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 SCYL2Q6P3W7 929 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 NUDCD3Q8IVD9 361 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 E2F7Q96AV8 911 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 PPP1R36Q96LQ0 422 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 UBE2OQ9C0C9 1292 aaKnown RBP15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 RPAP3Q9H6T3 665 aaPredicted RBP15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 TTLL3Q9Y4R7 772 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 TEX264Q9Y6I9 313 aa15.18■□□□□ 0.02
SEMA3F-202ENST00000413852 KCNN4O15554 427 aa15.17■□□□□ 0.02
SEMA3F-202ENST00000413852 RNF8O76064 485 aa15.17■□□□□ 0.02
SEMA3F-202ENST00000413852 CALB1P05937 261 aa15.17■□□□□ 0.02
SEMA3F-202ENST00000413852 GRIA2P42262 883 aa15.17■□□□□ 0.02
SEMA3F-202ENST00000413852 ZNF132P52740 706 aa15.17■□□□□ 0.02
SEMA3F-202ENST00000413852 RPL10AP62906 217 aaKnown RBP15.17■□□□□ 0.02
SEMA3F-202ENST00000413852 PIGHQ14442 188 aaPredicted RBP15.17■□□□□ 0.02
SEMA3F-202ENST00000413852 EML3Q32P44 896 aa15.17■□□□□ 0.02
SEMA3F-202ENST00000413852 CNPY1Q3B7I2 92 aa15.17■□□□□ 0.02
SEMA3F-202ENST00000413852 NDUFAF2Q8N183 169 aa15.17■□□□□ 0.02
SEMA3F-202ENST00000413852 MTBPQ96DY7 904 aa15.17■□□□□ 0.02
SEMA3F-202ENST00000413852 ECSITQ9BQ95 431 aa15.17■□□□□ 0.02
SEMA3F-202ENST00000413852 JPH1Q9HDC5 661 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms