RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	OVCA2	Q8WZ82	227 aa		13.86	□□□□□ -0.19
SF1-206	ENST00000413725	MRPS31	Q92665	395 aa	Known RBP	13.86	□□□□□ -0.19
SF1-206	ENST00000413725	DNAJC7	Q99615	494 aa		13.86	□□□□□ -0.19
SF1-206	ENST00000413725	ATXN3L	Q9H3M9	355 aa		13.86	□□□□□ -0.19
SF1-206	ENST00000413725	HAUS4	Q9H6D7	363 aa		13.86	□□□□□ -0.19
SF1-206	ENST00000413725	IL21	Q9HBE4	155 aa		13.86	□□□□□ -0.19
SF1-206	ENST00000413725	IL37	Q9NZH6	218 aa		13.86	□□□□□ -0.19
SF1-206	ENST00000413725	TRPM5	Q9NZQ8	1165 aa		13.86	□□□□□ -0.19
SF1-206	ENST00000413725	SCML2	Q9UQR0	700 aa		13.86	□□□□□ -0.19
SF1-206	ENST00000413725	NCAN	O14594	1321 aa		13.86	□□□□□ -0.19
SF1-206	ENST00000413725		A0A1W2PRU2	124 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	LCP1	P13796	627 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	CHRNB2	P17787	502 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	HNRNPH3	P31942	346 aa	Known RBP	13.85	□□□□□ -0.19
SF1-206	ENST00000413725	CDH5	P33151	784 aa	Predicted RBP	13.85	□□□□□ -0.19
SF1-206	ENST00000413725	MRE11	P49959	708 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	SLC5A9	Q2M3M2	681 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	GAREM2	Q75VX8	874 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	CCDC186	Q7Z3E2	898 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	SHKBP1	Q8TBC3	707 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	PPP1R13B	Q96KQ4	1090 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	PHF7	Q9BWX1	381 aa	Predicted RBP	13.85	□□□□□ -0.19
SF1-206	ENST00000413725	MIS12	Q9H081	205 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	SYNC	Q9H7C4	482 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	CNGB3	Q9NQW8	809 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	TLR8	Q9NR97	1041 aa	Known RBP	13.85	□□□□□ -0.19
SF1-206	ENST00000413725	ABHD10	Q9NUJ1	306 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
SF1-206	ENST00000413725	ZMYM5	Q9UJ78	669 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	USP3	Q9Y6I4	520 aa		13.85	□□□□□ -0.19
SF1-206	ENST00000413725	FAM92A	A1XBS5	289 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	SART1	O43290	800 aa	Known RBP	13.84	□□□□□ -0.19
SF1-206	ENST00000413725	FBXO21	O94952	628 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	ZBED1	O96006	694 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	ABL1	P00519	1130 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	F11	P03951	625 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	CYP1A1	P04798	512 aa	Predicted RBP	13.84	□□□□□ -0.19
SF1-206	ENST00000413725	USP17L7	P0C7H9	530 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	SKIL	P12757	684 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	DDX6	P26196	483 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
SF1-206	ENST00000413725	CCR2	P41597	374 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	RPL34	P49207	117 aa	Known RBP	13.84	□□□□□ -0.19
SF1-206	ENST00000413725	KCNQ1	P51787	676 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	ADK	P55263	362 aa	Known RBP	13.84	□□□□□ -0.19
SF1-206	ENST00000413725	NOMO3	P69849	1222 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	ARID5B	Q14865	1188 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	NAA35	Q5VZE5	725 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	PPP1R2P3	Q6NXS1	205 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	OTOP3	Q7RTS5	596 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	MON1A	Q86VX9	555 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	SCML4	Q8N228	414 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	ARHGAP18	Q8N392	663 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	WDTC1	Q8N5D0	677 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	ITFG1	Q8TB96	612 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	ING5	Q8WYH8	240 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	ANP32B	Q92688	251 aa	Known RBP	13.84	□□□□□ -0.19
SF1-206	ENST00000413725	ACSF2	Q96CM8	615 aa	Predicted RBP	13.84	□□□□□ -0.19
SF1-206	ENST00000413725	TCEAL4	Q96EI5	215 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	SLC4A5	Q9BY07	1137 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	ULBP1	Q9BZM6	244 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	SLITRK6	Q9H5Y7	841 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	GMIP	Q9P107	970 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	IMPACT	Q9P2X3	320 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	CYTH4	Q9UIA0	394 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	UST	Q9Y2C2	406 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	NR2E1	Q9Y466	385 aa		13.84	□□□□□ -0.19
SF1-206	ENST00000413725	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.84	□□□□□ -0.19
SF1-206	ENST00000413725	SOBP	A7XYQ1	873 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725		E5RJQ4	531 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	PIK3R2	O00459	728 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	TADA3	O75528	432 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	IL9	P15248	144 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	GJA1	P17302	382 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	CEBPB	P17676	345 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	GBP2	P32456	591 aa	Predicted RBP	13.83	□□□□□ -0.2
SF1-206	ENST00000413725	NSF	P46459	744 aa	Known RBP	13.83	□□□□□ -0.2
SF1-206	ENST00000413725	PSEN1	P49768	467 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	CYP4F8	P98187	520 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	GOLGA8F	Q08AF8	430 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	GOLGA8DP	Q0D2H9	430 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	GSE1	Q14687	1217 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	TEAD2	Q15562	447 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	CLEC16A	Q2KHT3	1053 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	GPR158	Q5T848	1215 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	PM20D1	Q6GTS8	502 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.83	□□□□□ -0.2
SF1-206	ENST00000413725	TMEM150A	Q86TG1	271 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	TMEM110	Q86TL2	294 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	ERICH1	Q86X53	443 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	NPAS3	Q8IXF0	933 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	TDRD5	Q8NAT2	981 aa	Known RBP	13.83	□□□□□ -0.2
SF1-206	ENST00000413725	SPC24	Q8NBT2	197 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	CPA5	Q8WXQ8	436 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	IRGQ	Q8WZA9	623 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	GOLGA1	Q92805	767 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	FGF13	Q92913	245 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	CPXM1	Q96SM3	734 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	SYT11	Q9BT88	431 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	GDE1	Q9NZC3	331 aa		13.83	□□□□□ -0.2
SF1-206	ENST00000413725	CDH7	Q9ULB5	785 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms