RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 DDX42Q86XP3 938 aaKnown RBP eCLIP19.83■□□□□ 0.77
ITGA6-204ENST00000412899 CNOT6LQ96LI5 555 aaKnown RBP19.83■□□□□ 0.77
ITGA6-204ENST00000412899 SLC39A2Q9NP94 309 aa19.83■□□□□ 0.77
ITGA6-204ENST00000412899 CACNA1BQ00975 2339 aa19.83■□□□□ 0.76
ITGA6-204ENST00000412899 MYO16Q9Y6X6 1858 aa19.83■□□□□ 0.76
ITGA6-204ENST00000412899 KIAA1549LQ6ZVL6 1849 aa19.83■□□□□ 0.76
ITGA6-204ENST00000412899 UBE4BO95155 1302 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 C4orf47A7E2U8 309 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 CLDN5O00501 218 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 ALDH1A2O94788 518 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 ZNF202O95125 648 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 APODP05090 189 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 MYL1P05976 194 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 YWHAQP27348 245 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 SLC6A11P48066 632 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 DAB2IPQ5VWQ8 1189 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 CYP2U1Q7Z449 544 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 NUP93Q8N1F7 819 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 B3GALNT2Q8NCR0 500 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 PDZD8Q8NEN9 1154 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 MDGA1Q8NFP4 955 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 ZNF516Q92618 1163 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 SYAP1Q96A49 352 aaPredicted RBP19.82■□□□□ 0.76
ITGA6-204ENST00000412899 B3GNT5Q9BYG0 378 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 EXOC1Q9NV70 894 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 TMEM30AQ9NV96 361 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 TBC1D14Q9P2M4 693 aa19.82■□□□□ 0.76
ITGA6-204ENST00000412899 PTPRDP23468 1912 aa19.81■□□□□ 0.76
ITGA6-204ENST00000412899 KHNYNO15037 678 aaKnown RBP19.81■□□□□ 0.76
ITGA6-204ENST00000412899 RTN3O95197 1032 aaPredicted RBP19.81■□□□□ 0.76
ITGA6-204ENST00000412899 KAT7O95251 611 aa19.81■□□□□ 0.76
ITGA6-204ENST00000412899 ADH1CP00326 375 aa19.81■□□□□ 0.76
ITGA6-204ENST00000412899 BCKDHBP21953 392 aa19.81■□□□□ 0.76
ITGA6-204ENST00000412899 ATICP31939 592 aa19.81■□□□□ 0.76
ITGA6-204ENST00000412899 TIE1P35590 1138 aa19.81■□□□□ 0.76
ITGA6-204ENST00000412899 EIF2DP41214 584 aaKnown RBP19.81■□□□□ 0.76
ITGA6-204ENST00000412899 DHPSP49366 369 aaPredicted RBP19.81■□□□□ 0.76
ITGA6-204ENST00000412899 PSAPL1Q6NUJ1 521 aa19.81■□□□□ 0.76
ITGA6-204ENST00000412899 RHBDF2Q6PJF5 856 aa19.81■□□□□ 0.76
ITGA6-204ENST00000412899 KRBA2Q6ZNG9 492 aa19.81■□□□□ 0.76
ITGA6-204ENST00000412899 ALLCQ8N6M5 410 aa19.81■□□□□ 0.76
ITGA6-204ENST00000412899 TXNDC5Q8NBS9 432 aaKnown RBP19.81■□□□□ 0.76
ITGA6-204ENST00000412899 SCFD1Q8WVM8 642 aa19.81■□□□□ 0.76
ITGA6-204ENST00000412899 FBXO32Q969P5 355 aa19.81■□□□□ 0.76
ITGA6-204ENST00000412899 ACACBO00763 2458 aa19.81■□□□□ 0.76
ITGA6-204ENST00000412899 ATP8B3O60423 1300 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 LNP1A1A4G5 178 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 KLRC4O43908 158 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 EXOC3O60645 756 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 KLF8O95600 359 aaPredicted RBP19.8■□□□□ 0.76
ITGA6-204ENST00000412899 STAU1O95793 577 aaKnown RBP19.8■□□□□ 0.76
ITGA6-204ENST00000412899 ADH5P11766 374 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 NOVA1P51513 510 aaKnown RBP19.8■□□□□ 0.76
ITGA6-204ENST00000412899 SHC2P98077 582 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 BIRC3Q13489 604 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 KMT5BQ4FZB7 885 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 TMEM92Q6UXU6 159 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 IL17RCQ8NAC3 791 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 OVCA2Q8WZ82 227 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 KCNK16Q96T55 309 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 MED10Q9BTT4 135 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 POLMQ9NP87 494 aaPredicted RBP19.8■□□□□ 0.76
ITGA6-204ENST00000412899 ARHGEF4Q9NR80 690 aa19.8■□□□□ 0.76
ITGA6-204ENST00000412899 BCCIPQ9P287 314 aaKnown RBP eCLIP19.8■□□□□ 0.76
ITGA6-204ENST00000412899 CGNQ9P2M7 1197 aaKnown RBP19.8■□□□□ 0.76
ITGA6-204ENST00000412899 CHORDC1Q9UHD1 332 aaPredicted RBP19.8■□□□□ 0.76
ITGA6-204ENST00000412899 E2F8A0AVK6 867 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.79■□□□□ 0.76
ITGA6-204ENST00000412899 MAP3K13O43283 966 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 RPN1P04843 607 aaKnown RBP19.79■□□□□ 0.76
ITGA6-204ENST00000412899 PRR29P0C7W0 189 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 GRIA2P42262 883 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 KDSRQ06136 332 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 MESP2Q0VG99 397 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 HSF5Q4G112 596 aaPredicted RBP19.79■□□□□ 0.76
ITGA6-204ENST00000412899 EOGTQ5NDL2 527 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 EMC10Q5UCC4 262 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 C12orf40Q86WS4 652 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 SFTPA1Q8IWL2 248 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 CCDC34Q96HJ3 373 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 SPACA7Q96KW9 195 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 XYLT2Q9H1B5 865 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 TMEM9BQ9NQ34 198 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 SH3BP1Q9Y3L3 701 aa19.79■□□□□ 0.76
ITGA6-204ENST00000412899 PATE3B3GLJ2 98 aa19.78■□□□□ 0.76
ITGA6-204ENST00000412899 SGK1O00141 431 aa19.78■□□□□ 0.76
ITGA6-204ENST00000412899 COCHO43405 550 aa19.78■□□□□ 0.76
ITGA6-204ENST00000412899 HNRNPLP14866 589 aaKnown RBP eCLIP19.78■□□□□ 0.76
ITGA6-204ENST00000412899 CASP4P49662 377 aa19.78■□□□□ 0.76
ITGA6-204ENST00000412899 CDH8P55286 799 aa19.78■□□□□ 0.76
ITGA6-204ENST00000412899 GAD2Q05329 585 aa19.78■□□□□ 0.76
ITGA6-204ENST00000412899 STK4Q13043 487 aa19.78■□□□□ 0.76
ITGA6-204ENST00000412899 KNOP1Q1ED39 458 aaKnown RBP19.78■□□□□ 0.76
ITGA6-204ENST00000412899 ZNF699Q32M78 642 aa19.78■□□□□ 0.76
ITGA6-204ENST00000412899 ZNF667Q5HYK9 610 aa19.78■□□□□ 0.76
ITGA6-204ENST00000412899 LY6G5CQ5SRR4 150 aa19.78■□□□□ 0.76
ITGA6-204ENST00000412899 HECTD3Q5T447 861 aa19.78■□□□□ 0.76
ITGA6-204ENST00000412899 BTBD8Q5XKL5 378 aa19.78■□□□□ 0.76
ITGA6-204ENST00000412899 FAM35AQ86V20 835 aa19.78■□□□□ 0.76
ITGA6-204ENST00000412899 C12orf56Q8IXR9 622 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms