RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 NET1Q7Z628 596 aaPredicted RBP8.82□□□□□ -1
PBRM1-209ENST00000412587 PLD3Q8IV08 490 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 CKAP2Q8WWK9 683 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 FAM163AQ96GL9 167 aaPredicted RBP8.82□□□□□ -1
PBRM1-209ENST00000412587 CELF4Q9BZC1 486 aaKnown RBP8.82□□□□□ -1
PBRM1-209ENST00000412587 VPS33BQ9H267 617 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 RNPEPQ9H4A4 650 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 MAGED2Q9UNF1 606 aaPredicted RBP8.82□□□□□ -1
PBRM1-209ENST00000412587 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.82□□□□□ -1
PBRM1-209ENST00000412587 A0A087WXM4 84 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 ITIH2P19823 946 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 ADORA2BP29275 332 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 ERVK-9P63128 1117 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 CNGA2Q16280 664 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 AKAP14Q86UN6 197 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 TTC13Q8NBP0 860 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 GMCL1P1Q8NEA9 526 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 ACTRT1Q8TDG2 376 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 SPIRE2Q8WWL2 714 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 TNIP3Q96KP6 325 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 NUP85Q9BW27 656 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 C12orf4Q9NQ89 552 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 UVRAGQ9P2Y5 699 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 TAGLN3Q9UI15 199 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 TLK1Q9UKI8 766 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 STARD13Q9Y3M8 1113 aa8.82□□□□□ -1
PBRM1-209ENST00000412587 VWA5AO00534 786 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 SLC37A4O43826 429 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 SHBGP04278 402 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 SHMT1P34896 483 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 ACTR2P61160 394 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 RBP5P82980 135 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 EIF2B5Q13144 721 aaKnown RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 SNRNP35Q16560 246 aaKnown RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 DGKDQ16760 1214 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 ZC2HC1CQ53FD0 456 aaPredicted RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 CMPK2Q5EBM0 449 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 TMTC4Q5T4D3 741 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 LVRNQ6Q4G3 990 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 RAPH1Q70E73 1250 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 LRRC71Q8N4P6 559 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 DNAJC1Q96KC8 554 aaKnown RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 HEMGNQ9BXL5 484 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 MANSC1Q9H8J5 431 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 MAP3K20Q9NYL2 800 aaKnown RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 PCSK1NQ9UHG2 260 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 SLC8A2Q9UPR5 921 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 FNDC3AQ9Y2H6 1198 aaKnown RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 WNT10BO00744 389 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 TEX28O15482 410 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 BNIP3LO60238 219 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 SEMA3DO95025 777 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 MAGEA10P43363 369 aaPredicted RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 DAB2P98082 770 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 EFCAB12Q6NXP0 572 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 MOXD1Q6UVY6 613 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 ZNF662Q6ZS27 426 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 PBXIP1Q96AQ6 731 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 LRRC39Q96DD0 335 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 CHID1Q9BWS9 393 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 CCDC90BQ9GZT6 254 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 PRMT7Q9NVM4 692 aaPredicted RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 GPC4O75487 556 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 PARNO95453 639 aaKnown RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 DDX5P17844 614 aaKnown RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 IL12RB1P42701 662 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 FMO5P49326 533 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 COPAP53621 1224 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 TMEM62Q0P6H9 643 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 FAM102AQ5T9C2 384 aaPredicted RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 C16orf89Q6UX73 402 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 SYDE1Q6ZW31 735 aaPredicted RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 TSPAN14Q8NG11 270 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.81□□□□□ -1
PBRM1-209ENST00000412587 RNF25Q96BH1 459 aaPredicted RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 BTBD6Q96KE9 485 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 MROH8Q9H579 483 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 PRDM5Q9NQX1 630 aaPredicted RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 SMYD2Q9NRG4 433 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 RRN3P2A6NIE6 340 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 DDX3XO00571 662 aaKnown RBP eCLIP8.81□□□□□ -1
PBRM1-209ENST00000412587 CYP26A1O43174 497 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 CPB1P15086 417 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 FOSL1P15407 271 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 KRT20P35900 424 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 SREBF1P36956 1147 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 MMP13P45452 471 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 IFI35P80217 286 aaPredicted RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 ZNF200P98182 395 aaPredicted RBP8.81□□□□□ -1
PBRM1-209ENST00000412587 FLOT2Q14254 428 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 PTF1AQ7RTS3 328 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 DHDDSQ86SQ9 333 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 AKT1S1Q96B36 256 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 TMEM106CQ9BVX2 250 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 IDI2Q9BXS1 227 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 RIOX1Q9H6W3 641 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 SNX9Q9Y5X1 595 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 IGSF9BQ9UPX0 1349 aa8.81□□□□□ -1
PBRM1-209ENST00000412587 C15orf38-AP3S2A0A0A6YYH1 394 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 STIP1P31948 543 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms