RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 PDK2Q15119 407 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 CCDC38Q502W7 563 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 MFSD14CQ5VZR4 134 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 CYP4F22Q6NT55 531 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 NPNTQ6UXI9 565 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 SLC26A9Q7LBE3 791 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 UNC45BQ8IWX7 931 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 SPATA18Q8TC71 538 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 ZNF473Q8WTR7 871 aaKnown RBP25.65■■□□□ 1.7
VRK2-202ENST00000412104 CENPTQ96BT3 561 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 TNIP3Q96KP6 325 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 UPF3AQ9H1J1 476 aaKnown RBP25.65■■□□□ 1.7
VRK2-202ENST00000412104 CYLDQ9NQC7 956 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 GPATCH2LQ9NWQ4 482 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 CTNNAL1Q9UBT7 734 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 GABRQQ9UN88 632 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 TLL2Q9Y6L7 1015 aa25.65■■□□□ 1.7
VRK2-202ENST00000412104 CA12O43570 354 aa25.64■■□□□ 1.69
VRK2-202ENST00000412104 RBP3P10745 1247 aa25.64■■□□□ 1.69
VRK2-202ENST00000412104 LCP1P13796 627 aa25.64■■□□□ 1.69
VRK2-202ENST00000412104 TKTP29401 623 aaKnown RBP25.64■■□□□ 1.69
VRK2-202ENST00000412104 CTCFP49711 727 aaPredicted RBP25.64■■□□□ 1.69
VRK2-202ENST00000412104 FCGRTP55899 365 aa25.64■■□□□ 1.69
VRK2-202ENST00000412104 NOMO1Q15155 1222 aa25.64■■□□□ 1.69
VRK2-202ENST00000412104 FAM47CQ5HY64 1035 aa25.64■■□□□ 1.69
VRK2-202ENST00000412104 TAOK1Q7L7X3 1001 aa25.64■■□□□ 1.69
VRK2-202ENST00000412104 PCGF5Q86SE9 256 aa25.64■■□□□ 1.69
VRK2-202ENST00000412104 MAP7D3Q8IWC1 876 aa25.64■■□□□ 1.69
VRK2-202ENST00000412104 ZIC5Q96T25 663 aa25.64■■□□□ 1.69
VRK2-202ENST00000412104 TBCBQ99426 244 aa25.64■■□□□ 1.69
VRK2-202ENST00000412104 SNRNP25Q9BV90 132 aaKnown RBP25.64■■□□□ 1.69
VRK2-202ENST00000412104 ST3GAL5Q9UNP4 418 aa25.64■■□□□ 1.69
VRK2-202ENST00000412104 GMNCA6NCL1 334 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 MEIS3P2A8K0S8 358 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 CTSHP09668 335 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 RPL22P35268 128 aaKnown RBP25.63■■□□□ 1.69
VRK2-202ENST00000412104 SCNN1AP37088 669 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 HDAC4P56524 1084 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 ZC3H12AQ5D1E8 599 aaKnown RBP25.63■■□□□ 1.69
VRK2-202ENST00000412104 SRLQ86TD4 932 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 RSPH3Q86UC2 560 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 EXOC3L1Q86VI1 746 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 B3GALNT2Q8NCR0 500 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 RNF157Q96PX1 679 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 TFE3P19532 575 aaPredicted RBP25.63■■□□□ 1.69
VRK2-202ENST00000412104 ATP5DP30049 168 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 PTPN9P43378 593 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 STAT4Q14765 748 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 FASTKD3Q14CZ7 662 aaKnown RBP25.63■■□□□ 1.69
VRK2-202ENST00000412104 CCDC142Q17RM4 750 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.63■■□□□ 1.69
VRK2-202ENST00000412104 TTC25Q96NG3 672 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 XPO6Q96QU8 1125 aaKnown RBP25.63■■□□□ 1.69
VRK2-202ENST00000412104 NCAPGQ9BPX3 1015 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 PCDH18Q9HCL0 1135 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 FAM105AQ9NUU6 356 aa25.63■■□□□ 1.69
VRK2-202ENST00000412104 MDM4O15151 490 aa25.62■■□□□ 1.69
VRK2-202ENST00000412104 IL4RP24394 825 aa25.62■■□□□ 1.69
VRK2-202ENST00000412104 ACADSBP45954 432 aa25.62■■□□□ 1.69
VRK2-202ENST00000412104 ERMARDQ5T6L9 678 aa25.62■■□□□ 1.69
VRK2-202ENST00000412104 PPIL6Q8IXY8 311 aa25.62■■□□□ 1.69
VRK2-202ENST00000412104 FAM71DQ8N9W8 422 aa25.62■■□□□ 1.69
VRK2-202ENST00000412104 CPT1BQ92523 772 aa25.62■■□□□ 1.69
VRK2-202ENST00000412104 P3H4Q92791 437 aa25.62■■□□□ 1.69
VRK2-202ENST00000412104 ARHGEF2Q92974 986 aaKnown RBP25.62■■□□□ 1.69
VRK2-202ENST00000412104 HSFY1Q96LI6 401 aa25.62■■□□□ 1.69
VRK2-202ENST00000412104 C11orf84Q9BUA3 381 aaPredicted RBP25.62■■□□□ 1.69
VRK2-202ENST00000412104 SENP6Q9GZR1 1112 aaPredicted RBP25.62■■□□□ 1.69
VRK2-202ENST00000412104 FAM107BQ9H098 131 aa25.62■■□□□ 1.69
VRK2-202ENST00000412104 RRP15Q9Y3B9 282 aaKnown RBP25.62■■□□□ 1.69
VRK2-202ENST00000412104 CYB561D2O14569 222 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 TM4SF4P48230 202 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 ROR1Q01973 937 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 CA9Q16790 459 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 ANKRD22Q5VYY1 191 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 CENPUQ71F23 418 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 ARCQ7LC44 396 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 ATXN2LQ8WWM7 1075 aaKnown RBP25.61■■□□□ 1.69
VRK2-202ENST00000412104 CCDC77Q9BR77 488 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 SPC25Q9HBM1 224 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 LGALS13Q9UHV8 139 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.61■■□□□ 1.69
VRK2-202ENST00000412104 A0A087WUV0 522 aaPredicted RBP25.61■■□□□ 1.69
VRK2-202ENST00000412104 CHRNA1P02708 482 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 MLH1P40692 756 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 ANKRD20A8PQ5CZ79 823 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 SERINC5Q86VE9 423 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 ZC3H18Q86VM9 953 aaKnown RBP25.61■■□□□ 1.69
VRK2-202ENST00000412104 NAT8LQ8N9F0 302 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 GSTCDQ8NEC7 633 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 ADAM33Q9BZ11 813 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 CACNG4Q9UBN1 327 aa25.61■■□□□ 1.69
VRK2-202ENST00000412104 GOLGA8MH3BSY2 632 aa25.6■■□□□ 1.69
VRK2-202ENST00000412104 XPO1O14980 1071 aaKnown RBP25.6■■□□□ 1.69
VRK2-202ENST00000412104 ATP2C2O75185 946 aa25.6■■□□□ 1.69
VRK2-202ENST00000412104 RARBP10826 455 aa25.6■■□□□ 1.69
VRK2-202ENST00000412104 IGFBP6P24592 240 aaPredicted RBP25.6■■□□□ 1.69
VRK2-202ENST00000412104 FLT3LGP49771 235 aa25.6■■□□□ 1.69
VRK2-202ENST00000412104 TRIM32Q13049 653 aa25.6■■□□□ 1.69
VRK2-202ENST00000412104 HP1BP3Q5SSJ5 553 aaPredicted RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms