RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 CAPN8A6NHC0 703 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 TCP11X1B4DZS4 312 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 INPPL1O15357 1258 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 SLC28A2O43868 658 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ENO2P09104 434 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 MAPK6Q16659 721 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 SPDYAQ5MJ70 313 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF804AQ7Z570 1209 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 HPS6Q86YV9 775 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 RP9Q8TA86 221 aaKnown RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 SETD6Q8TBK2 473 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 MYCBPAPQ8TBZ2 947 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 SLC20A1Q8WUM9 679 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 RHBDF1Q96CC6 855 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 CEP295NLQ96MC4 621 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ZSWIM3Q96MP5 696 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PLEKHF1Q96S99 279 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PANK2Q9BZ23 570 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 COPS7BQ9H9Q2 264 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PRDM8Q9NQV8 689 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 NDFIP2Q9NV92 336 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 INTS7Q9NVH2 962 aaKnown RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 BTBD7Q9P203 1132 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 AK6Q9Y3D8 172 aaKnown RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ALG5Q9Y673 324 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 L7N2F9 121 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 SPTLC2O15270 562 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 RAD51BO15315 384 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PFKFB2O60825 505 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ATG7O95352 703 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 CYB5AP00167 134 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 EGFRP00533 1210 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 AFPP02771 609 aaKnown RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ALOX5P09917 674 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 AFF1P51825 1210 aaKnown RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 THOP1P52888 689 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 VAMP2P63027 116 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PTK2Q05397 1052 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ENPEPQ07075 957 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 R3HDM1Q15032 1099 aaKnown RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 BORAQ6PGQ7 559 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 AGMOQ6ZNB7 445 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 MICU3Q86XE3 530 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 C7orf61Q8IZ16 206 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 IQCF1Q8N6M8 205 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ZBTB38Q8NAP3 1195 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 KCTD6Q8NC69 237 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 TMEM161BQ8NDZ6 487 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 DENND2DQ9H6A0 471 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 BABAM1Q9NWV8 329 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 MED11Q9P086 117 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 GRID1Q9ULK0 1009 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 C6orf229H3BNL8 230 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 CLOCKO15516 846 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 CLN5O75503 358 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 LARGE1O95461 756 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 CCNE2O96020 404 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 CFL1P23528 166 aaKnown RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 RBL1P28749 1068 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 VHLP40337 213 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 E2F4Q16254 413 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 C12orf60Q5U649 245 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF852Q6ZMS4 543 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 BRINP3Q76B58 766 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 BPIFB6Q8NFQ5 453 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PYROXD1Q8WU10 500 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 TRIM43Q96BQ3 446 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ZBED3Q96IU2 234 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF578Q96N58 590 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 OR5B12Q96R08 314 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PIGSQ96S52 555 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 IDI2Q9BXS1 227 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF180Q9UJW8 692 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PCDHGC3Q9UN70 934 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 WASF3Q9UPY6 502 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 A0A0G2JND7 137 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 IRGMA1A4Y4 181 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ANKRD33BA6NCL7 494 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 HAT1O14929 419 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ZBED4O75132 1171 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SPAG6O75602 509 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 OR6B1O95007 311 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 DHFRP00374 187 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 IFNA1P01562 189 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SLC3A1Q07837 685 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 DMTNQ08495 405 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TFDP2Q14188 446 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SURF1Q15526 300 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 BCL2A1Q16548 175 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 C15orf59Q2T9L4 293 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 C11orf91Q3C1V1 193 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ALDH1L2Q3SY69 923 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 RNASEH2BQ5TBB1 312 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TAF2Q6P1X5 1199 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TTLL10Q6ZVT0 673 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 C11orf74Q86VG3 221 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TREML1Q86YW5 311 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 UPF1Q92900 1129 aaKnown RBP eCLIP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 PBKQ96KB5 322 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms