RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 DYNLT1P63172 113 aa21.08■□□□□ 0.97
SUMO3-204ENST00000411651 C15orf59Q2T9L4 293 aaPredicted RBP21.08■□□□□ 0.97
SUMO3-204ENST00000411651 TWF2Q6IBS0 349 aaKnown RBP21.08■□□□□ 0.97
SUMO3-204ENST00000411651 EXOC3L1Q86VI1 746 aa21.08■□□□□ 0.97
SUMO3-204ENST00000411651 ADGRF2Q8IZF7 708 aa21.08■□□□□ 0.97
SUMO3-204ENST00000411651 UHMK1Q8TAS1 419 aaKnown RBP21.08■□□□□ 0.97
SUMO3-204ENST00000411651 FAM172AQ8WUF8 416 aa21.08■□□□□ 0.97
SUMO3-204ENST00000411651 ATXN2LQ8WWM7 1075 aaKnown RBP21.08■□□□□ 0.97
SUMO3-204ENST00000411651 RTP4Q96DX8 246 aa21.08■□□□□ 0.97
SUMO3-204ENST00000411651 HNRNPABQ99729 332 aaKnown RBP21.08■□□□□ 0.97
SUMO3-204ENST00000411651 RNF39Q9H2S5 420 aa21.08■□□□□ 0.97
SUMO3-204ENST00000411651 DPEP3Q9H4B8 488 aa21.08■□□□□ 0.97
SUMO3-204ENST00000411651 NMRK2Q9NPI5 230 aa21.08■□□□□ 0.97
SUMO3-204ENST00000411651 TULP2O00295 520 aa21.08■□□□□ 0.96
SUMO3-204ENST00000411651 XPO1O14980 1071 aaKnown RBP21.08■□□□□ 0.96
SUMO3-204ENST00000411651 IFNB1P01574 187 aa21.08■□□□□ 0.96
SUMO3-204ENST00000411651 RBP3P10745 1247 aa21.08■□□□□ 0.96
SUMO3-204ENST00000411651 CHN1P15882 459 aa21.08■□□□□ 0.96
SUMO3-204ENST00000411651 SLCO1A2P46721 670 aa21.08■□□□□ 0.96
SUMO3-204ENST00000411651 SOX4Q06945 474 aaPredicted RBP21.08■□□□□ 0.96
SUMO3-204ENST00000411651 TAF5Q15542 800 aa21.08■□□□□ 0.96
SUMO3-204ENST00000411651 MFSD14CQ5VZR4 134 aa21.08■□□□□ 0.96
SUMO3-204ENST00000411651 SLC9A4Q6AI14 798 aa21.08■□□□□ 0.96
SUMO3-204ENST00000411651 YTHDF3Q7Z739 585 aaKnown RBP21.08■□□□□ 0.96
SUMO3-204ENST00000411651 NAT8LQ8N9F0 302 aa21.08■□□□□ 0.96
SUMO3-204ENST00000411651 SPATA18Q8TC71 538 aa21.08■□□□□ 0.96
SUMO3-204ENST00000411651 P3H4Q92791 437 aa21.08■□□□□ 0.96
SUMO3-204ENST00000411651 ARHGEF2Q92974 986 aaKnown RBP21.08■□□□□ 0.96
SUMO3-204ENST00000411651 SPC25Q9HBM1 224 aa21.08■□□□□ 0.96
SUMO3-204ENST00000411651 SAYSD1Q9NPB0 183 aa21.08■□□□□ 0.96
SUMO3-204ENST00000411651 PPANQ9NQ55 473 aaKnown RBP21.08■□□□□ 0.96
SUMO3-204ENST00000411651 SMIM23A6NLE4 172 aa21.07■□□□□ 0.96
SUMO3-204ENST00000411651 E7ESA3 106 aa21.07■□□□□ 0.96
SUMO3-204ENST00000411651 GABBR2O75899 941 aa21.07■□□□□ 0.96
SUMO3-204ENST00000411651 ETS1P14921 441 aa21.07■□□□□ 0.96
SUMO3-204ENST00000411651 TM4SF4P48230 202 aa21.07■□□□□ 0.96
SUMO3-204ENST00000411651 CTCFP49711 727 aaPredicted RBP21.07■□□□□ 0.96
SUMO3-204ENST00000411651 CRHR2Q13324 411 aa21.07■□□□□ 0.96
SUMO3-204ENST00000411651 KRT81Q14533 505 aa21.07■□□□□ 0.96
SUMO3-204ENST00000411651 PRUNE1Q86TP1 453 aa21.07■□□□□ 0.96
SUMO3-204ENST00000411651 KLK14Q9P0G3 267 aa21.07■□□□□ 0.96
SUMO3-204ENST00000411651 FAM155AB1AL88 458 aaPredicted RBP21.06■□□□□ 0.96
SUMO3-204ENST00000411651 PTGESO14684 152 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 CA12O43570 354 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 C6orf222P0C671 652 aaPredicted RBP21.06■□□□□ 0.96
SUMO3-204ENST00000411651 SEC24CP53992 1094 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 FCGRTP55899 365 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 SLC8A3P57103 927 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 ROR1Q01973 937 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 DPYSL2Q16555 572 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 HIF1AQ16665 826 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 EFHC1Q5JVL4 640 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 SH3PXD2AQ5TCZ1 1133 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 C4orf22Q6V702 233 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 STRADAQ7RTN6 431 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 PSTKQ8IV42 348 aaKnown RBP21.06■□□□□ 0.96
SUMO3-204ENST00000411651 ARRDC4Q8NCT1 418 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 TRPV1Q8NER1 839 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.06■□□□□ 0.96
SUMO3-204ENST00000411651 CPT1BQ92523 772 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 SELENOSQ9BQE4 189 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 FRMD8Q9BZ67 464 aaPredicted RBP21.06■□□□□ 0.96
SUMO3-204ENST00000411651 INTS9Q9NV88 658 aaKnown RBP21.06■□□□□ 0.96
SUMO3-204ENST00000411651 GABRDO14764 452 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 ZFXP17010 805 aaPredicted RBP21.06■□□□□ 0.96
SUMO3-204ENST00000411651 IL4RP24394 825 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 RPL22P35268 128 aaKnown RBP21.06■□□□□ 0.96
SUMO3-204ENST00000411651 GDF10P55107 478 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 HDAC4P56524 1084 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 ARL4CP56559 192 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 SKIDA1Q1XH10 827 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 SCUBE3Q8IX30 993 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 B3GALNT2Q8NCR0 500 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 KCTD13Q8WZ19 329 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 CHMP6Q96FZ7 201 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 C9orf72Q96LT7 481 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 PWWP2AQ96N64 755 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 PCDH18Q9HCL0 1135 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 NGRNQ9NPE2 291 aaKnown RBP21.06■□□□□ 0.96
SUMO3-204ENST00000411651 UBN1Q9NPG3 1134 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 DNAJC17Q9NVM6 304 aaKnown RBP21.06■□□□□ 0.96
SUMO3-204ENST00000411651 SAE1Q9UBE0 346 aaPredicted RBP21.06■□□□□ 0.96
SUMO3-204ENST00000411651 CDY2AQ9Y6F7 541 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 TLL2Q9Y6L7 1015 aa21.06■□□□□ 0.96
SUMO3-204ENST00000411651 LMO2P25791 158 aa21.05■□□□□ 0.96
SUMO3-204ENST00000411651 GNASQ5JWF2 1037 aa21.05■□□□□ 0.96
SUMO3-204ENST00000411651 SERINC5Q86VE9 423 aa21.05■□□□□ 0.96
SUMO3-204ENST00000411651 TMEM86AQ8N2M4 240 aa21.05■□□□□ 0.96
SUMO3-204ENST00000411651 PPP1R13LQ8WUF5 828 aa21.05■□□□□ 0.96
SUMO3-204ENST00000411651 SNRNP25Q9BV90 132 aaKnown RBP21.05■□□□□ 0.96
SUMO3-204ENST00000411651 DUSP16Q9BY84 665 aa21.05■□□□□ 0.96
SUMO3-204ENST00000411651 SENP6Q9GZR1 1112 aaPredicted RBP21.05■□□□□ 0.96
SUMO3-204ENST00000411651 SLC24A2Q9UI40 661 aa21.05■□□□□ 0.96
SUMO3-204ENST00000411651 APOL1O14791 398 aa21.04■□□□□ 0.96
SUMO3-204ENST00000411651 GRAP2O75791 330 aa21.04■□□□□ 0.96
SUMO3-204ENST00000411651 CCDC130P13994 396 aa21.04■□□□□ 0.96
SUMO3-204ENST00000411651 CORO7P57737 925 aa21.04■□□□□ 0.96
SUMO3-204ENST00000411651 ATP11AP98196 1134 aa21.04■□□□□ 0.96
SUMO3-204ENST00000411651 CDO1Q16878 200 aa21.04■□□□□ 0.96
SUMO3-204ENST00000411651 ANKRD20A8PQ5CZ79 823 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms