RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 IGBP1P78318 339 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 LMAN2Q12907 356 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 ZNF268Q14587 947 aaPredicted RBP2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 LRRC41Q15345 812 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 C3orf38Q5JPI3 329 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 PXDC1Q5TGL8 231 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 CACHD1Q5VU97 1274 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 APOA5Q6Q788 366 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 ZNF813Q6ZN06 617 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 PTCHD4Q6ZW05 846 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 MAEAQ7L5Y9 396 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 SFTPA1Q8IWL2 248 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 FAM177A1Q8N128 213 aaPredicted RBP2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 NRACQ8N912 160 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 RUNDC1Q96C34 613 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 CTHRC1Q96CG8 243 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 HMCESQ96FZ2 354 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 FYTTD1Q96QD9 318 aaKnown RBP2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 PPP1R9BQ96SB3 815 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 FAM118BQ9BPY3 351 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 STK31Q9BXU1 1019 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 C22orf23Q9BZE7 217 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 TRIM5Q9C035 493 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 TMEM60Q9H2L4 133 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 A1CFQ9NQ94 594 aaKnown RBP2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 XPNPEP3Q9NQH7 507 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 DNMT3BQ9UBC3 853 aaKnown RBP2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 USP22Q9UPT9 525 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 THRAP3Q9Y2W1 955 aaKnown RBP2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 AFG3L2Q9Y4W6 797 aa2.47□□□□□ -2.01
RNU2-54P-201ENST00000410299 LOC102723971A0A1B0GUV8 181 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 CFAP69A5D8W1 941 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 TRIM43BA6NCK2 446 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 CAPN8A6NHC0 703 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 BTBD19C9JJ37 291 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 TMEM232C9JQI7 657 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 PYCARD-AS1I3L0S3 204 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 AGPSO00116 658 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 TRIM38O00635 465 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 DSCR3O14972 297 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 CD3EAPO15446 510 aaKnown RBP2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 KCNAB3O43448 404 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 SPRY2O43597 315 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 RRP9O43818 475 aaKnown RBP2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 RASSF9O75901 435 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 NTN1O95631 604 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 A1BGP04217 495 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 APEHP13798 732 aaKnown RBP2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 CREB1P16220 341 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 ZKSCAN1P17029 563 aaPredicted RBP2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 HOXD9P28356 352 aaPredicted RBP2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 EPHA3P29320 983 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 PTDSS1P48651 473 aaKnown RBP2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 CCT4P50991 539 aaKnown RBP2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 PLCD1P51178 756 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 TIRAPP58753 221 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 FHL1Q13642 323 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 CNN3Q15417 329 aaKnown RBP2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 SEC23BQ15437 767 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 NPY5RQ15761 445 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 INSCQ1MX18 579 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 ZNF260Q3ZCT1 412 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 MEX3CQ5U5Q3 659 aaKnown RBP2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 TMEM65Q6PI78 240 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 SHC4Q6S5L8 630 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 IRF2BP2Q7Z5L9 587 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 KIAA0319LQ8IZA0 1049 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 MAFAQ8NHW3 353 aaPredicted RBP2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 ZNF398Q8TD17 642 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 PNISRQ8TF01 805 aaKnown RBP2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 SPSB4Q96A44 273 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 TRIM43Q96BQ3 446 aaPredicted RBP2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 WDYHV1Q96HA8 205 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 SUCLG2Q96I99 432 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 WACQ9BTA9 647 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 VN1R3Q9BXE9 311 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 L1RE1Q9UN81 338 aa2.46□□□□□ -2.02
RNU2-54P-201ENST00000410299 A6NNZ2 444 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 RAB27BO00194 218 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 EXOC5O00471 708 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 IKBKBO14920 756 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 MARCH6O60337 910 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 PIAS2O75928 621 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 FGBP02675 491 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 CYP19A1P11511 503 aaPredicted RBP2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 PRF1P14222 555 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 BRAFP15056 766 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 MTHFSP49914 203 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 GATMP50440 423 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 PGDP52209 483 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 RPS16P62249 146 aaKnown RBP2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 TIAL1Q01085 375 aaKnown RBP eCLIP2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 GHRHRQ02643 423 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 STK3Q13188 491 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 LARS2Q15031 903 aaKnown RBP2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 RBMS2Q15434 407 aaKnown RBP2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 ODR4Q5SWX8 454 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 CXorf57Q6NSI4 855 aaKnown RBP2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 DCDC5Q6ZRR9 648 aa2.45□□□□□ -2.02
RNU2-54P-201ENST00000410299 KRT73Q86Y46 540 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms