RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PLA2G6O60733 806 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 SEZ6Q53EL9 994 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 EFHC1Q5JVL4 640 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 SCARA3Q6AZY7 606 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 FBXO16Q8IX29 292 aaPredicted RBP11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 MYLK2Q9H1R3 596 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 STRIP1Q5VSL9 837 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 FRMD5Q7Z6J6 570 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 UNC45BQ8IWX7 931 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 ADGRF2Q8IZF7 708 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 UBXN6Q9BZV1 441 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 MYH14Q7Z406 1995 aaKnown RBP11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 DGAT1O75907 488 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 MTA2O94776 668 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 THP07101 528 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 CLTBP09497 229 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 DPEP1P16444 411 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 RAP1GAPP47736 663 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 TYW3Q6IPR3 259 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 ZNF333Q96JL9 665 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 TLR8Q9NR97 1041 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 SH3BP4Q9P0V3 963 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 PLA2R1Q13018 1463 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 PDZK1P1A8MUH7 402 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 CNPP09543 421 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 AMD1P17707 334 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 HALP42357 657 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 PRR5LQ6MZQ0 368 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 FAM71DQ8N9W8 422 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 RBBP8NLQ8NC74 664 aaPredicted RBP11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 WDR36Q8NI36 951 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 NSUN4Q96CB9 384 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 ATXN3LQ9H3M9 355 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 ELL3Q9HB65 397 aaPredicted RBP11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 STOML1Q9UBI4 398 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 AMACRQ9UHK6 382 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 BLOC1S6Q9UL45 172 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 SESN1Q9Y6P5 492 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 RHOCP08134 193 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 GRK2P25098 689 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 SLC1A1P43005 524 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 ARF5P84085 180 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 CNGA2Q16280 664 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 MYO1HQ8N1T3 1032 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 RNPC3Q96LT9 517 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 EPC1Q9H2F5 836 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 KLHL1Q9NR64 748 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.6□□□□□ -0.553e-6■■□□□ 12.7
PRPF40A-202ENST00000410080 APEX2Q9UBZ4 518 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 NEU2Q9Y3R4 380 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 RNF17Q9BXT8 1623 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 GMNCA6NCL1 334 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 KATNA1O75449 491 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 SLC2A3P11169 496 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 SERPINB5P36952 375 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 ACTN3Q08043 901 aaPredicted RBP11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 AKIRIN2Q53H80 203 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 SRLQ86TD4 932 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 EPHX4Q8IUS5 362 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 PRKD2Q9BZL6 878 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 DPP7Q9UHL4 492 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 CNTNAP2Q9UHC6 1331 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 NPY2RP49146 381 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 FNTAP49354 379 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 KRT35Q92764 455 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 CAAP1Q9H8G2 361 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 CYP4F12Q9HCS2 524 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 ANKRD65E5RJM6 399 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 PTGER2P43116 358 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 EDRF1Q3B7T1 1238 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 AGAP9Q5VTM2 703 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 ZNF544Q6NX49 715 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 WWP1Q9H0M0 922 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 TRIT1Q9H3H1 467 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 NT5MQ9NPB1 228 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 SPATA31E1Q6ZUB1 1445 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 MOXD2PA6NHM9 499 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 SNTNA6NMZ2 147 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 MEI4A8MW99 385 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 DLGAP3O95886 979 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 BTG3Q14201 252 aaPredicted RBP11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 PTPAQ15257 358 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 SETMARQ53H47 684 aaPredicted RBP11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 CDK20Q8IZL9 346 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 SCAIQ8N9R8 606 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 PDGFCQ9NRA1 345 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 VPS9D1Q9Y2B5 631 aa11.6□□□□□ -0.55
PRPF40A-202ENST00000410080 PIPSLA2A3N6 862 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 RGL2O15211 777 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 OR6A2O95222 327 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 MAPKAPK2P49137 400 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 CLCN6P51797 869 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 ZC2HC1CQ53FD0 456 aaPredicted RBP11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 EMBQ6PCB8 327 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 KIAA1324Q6UXG2 1013 aaKnown RBP11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 CCDC149Q6ZUS6 474 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 DET1Q7L5Y6 550 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 PRUNE1Q86TP1 453 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 BRSK2Q8IWQ3 736 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 COL26A1Q96A83 441 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms