RNA–Protein interactions for RNA: ENST00000409767.5

PBRM1-207, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-207ENST00000409767 RBP3P10745 1247 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 COMTP21964 271 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 GLRA2P23416 452 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 TKTL1P51854 596 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 TWF1Q12792 350 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 TTLL9Q3SXZ7 439 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 TMCO4Q5TGY1 634 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 PDE12Q6L8Q7 609 aaKnown RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 UGT3A1Q6NUS8 523 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 TRMT10CQ7L0Y3 403 aaKnown RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 NOP9Q86U38 636 aaKnown RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 LRRC52Q8N7C0 313 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 TFB1MQ8WVM0 346 aaKnown RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 ALKBH8Q96BT7 664 aaKnown RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 GAD1Q99259 594 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 PARD6BQ9BYG5 372 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 ZNF576Q9H609 170 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 MRPL40Q9NQ50 206 aaKnown RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 PCDHA11Q9Y5I1 949 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 CST8O60676 142 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 SNAI1O95863 264 aaPredicted RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 GLUD1P00367 558 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 RHOCP08134 193 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 VCLP18206 1134 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 TYK2P29597 1187 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 AKT1P31749 480 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 ARL4DP49703 201 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 PURAQ00577 322 aaKnown RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 SEZ6Q53EL9 994 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 FSCBQ5H9T9 825 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 NUGGCQ68CJ6 796 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 DDI1Q8WTU0 396 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 TRAPPC12Q8WVT3 735 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 CASP10Q92851 521 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 SENP8Q96LD8 212 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 HSFY1Q96LI6 401 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 DNAJC7Q99615 494 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 HSD17B14Q9BPX1 270 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 VPS11Q9H270 941 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 BLOC1S4Q9NUP1 217 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 PCDHA2Q9Y5H9 948 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 DLG5Q8TDM6 1919 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 IGKV6D-41A0A0C4DH26 115 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 FAM237AA0A1B0GTK4 181 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 A0A1W2PPC1 479 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 C2orf81A6NN90 581 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 ZW10O43264 779 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 MAP3K13O43283 966 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 ITGB5P18084 799 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 FNTAP49354 379 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 CASP4P49662 377 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 FXR1P51114 621 aaKnown RBP eCLIP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 ATXN3P54252 364 aaPredicted RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 MKRN4PQ13434 485 aaPredicted RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 RRP1BQ14684 758 aaKnown RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 IMPG1Q17R60 797 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 HYIQ5T013 277 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 ABHD15Q6UXT9 468 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 ACAD11Q709F0 780 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 PDLIM2Q96JY6 352 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 SRPK1Q96SB4 655 aaKnown RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 SERPINI1Q99574 410 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 SPATA16Q9BXB7 569 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 SLC7A5P2Q9GIP4 190 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 EML4Q9HC35 981 aaKnown RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 VCX3AQ9NNX9 186 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 RAB6BQ9NRW1 208 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 FGFR1OP2Q9NVK5 253 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 GJD2Q9UKL4 321 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 TTC7AQ9ULT0 858 aaPredicted RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 TRIM33Q9UPN9 1127 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 STX7O15400 261 aaKnown RBP6.57□□□□□ -1.36
PBRM1-207ENST00000409767 ATP9BO43861 1147 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 GRAP2O75791 330 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 POLBP06746 335 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 AKAP5P24588 427 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 NDST1P52848 882 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 MAP3K7CLP57077 242 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 YWHAZP63104 245 aaKnown RBP6.57□□□□□ -1.36
PBRM1-207ENST00000409767 EFEMP1Q12805 493 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 METTL3Q86U44 580 aaKnown RBP6.57□□□□□ -1.36
PBRM1-207ENST00000409767 MIB1Q86YT6 1006 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 MAFAQ8NHW3 353 aaPredicted RBP6.57□□□□□ -1.36
PBRM1-207ENST00000409767 ETNPPLQ8TBG4 499 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 GIPC2Q8TF65 315 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 C1orf54Q8WWF1 131 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 SNX19Q92543 992 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 SHDQ96IW2 340 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 NIFKQ9BYG3 293 aaKnown RBP6.57□□□□□ -1.36
PBRM1-207ENST00000409767 DDX47Q9H0S4 455 aaKnown RBP6.57□□□□□ -1.36
PBRM1-207ENST00000409767 GOLPH3Q9H4A6 298 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 PRDM12Q9H4Q4 367 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 UTP6Q9NYH9 597 aaKnown RBP6.57□□□□□ -1.36
PBRM1-207ENST00000409767 COG5Q9UP83 839 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 TNRC6CQ9HCJ0 1690 aaKnown RBP6.57□□□□□ -1.36
PBRM1-207ENST00000409767 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.57□□□□□ -1.36
PBRM1-207ENST00000409767 RASA4BC9J798 803 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 F8VZ95 297 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 PIK3R2O00459 728 aa6.57□□□□□ -1.36
PBRM1-207ENST00000409767 ZNF263O14978 683 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms