RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 SLC22A12Q96S37 553 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 TRMT61BQ9BVS5 477 aaKnown RBP20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 C1QTNF1Q9BXJ1 281 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 STK33Q9BYT3 514 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 SMG9Q9H0W8 520 aaKnown RBP20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 GANQ9H2C0 597 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 ACP6Q9NPH0 428 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 TDP1Q9NUW8 608 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 ZNF638Q14966 1978 aaKnown RBP20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 M0QYV0 167 aa20.92■□□□□ 0.94
PDLIM2-207ENST00000409417 TULP2O00295 520 aa20.92■□□□□ 0.94
PDLIM2-207ENST00000409417 ABL1P00519 1130 aa20.92■□□□□ 0.94
PDLIM2-207ENST00000409417 CKMP06732 381 aa20.92■□□□□ 0.94
PDLIM2-207ENST00000409417 TUBP50607 506 aa20.92■□□□□ 0.94
PDLIM2-207ENST00000409417 GPC5P78333 572 aa20.92■□□□□ 0.94
PDLIM2-207ENST00000409417 PTK2Q05397 1052 aa20.92■□□□□ 0.94
PDLIM2-207ENST00000409417 CCDC186Q7Z3E2 898 aa20.92■□□□□ 0.94
PDLIM2-207ENST00000409417 ARL14EPQ8N8R7 260 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-207ENST00000409417 SLC35F5Q8WV83 523 aa20.92■□□□□ 0.94
PDLIM2-207ENST00000409417 LRRC3BQ96PB8 259 aa20.92■□□□□ 0.94
PDLIM2-207ENST00000409417 RTN4Q9NQC3 1192 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-207ENST00000409417 DENND4CQ5VZ89 1909 aa20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 GOLGA6L19H0YKK7 550 aa20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 THAP12O43422 761 aa20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 OAS1P00973 400 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 BPIFB4P59827 614 aa20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 FCHO2Q0JRZ9 810 aa20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 GRM2Q14416 872 aa20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 FILIP1LQ4L180 1135 aa20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 LRSAM1Q6UWE0 723 aa20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 KCTD13Q8WZ19 329 aa20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 SECISBP2LQ93073 1101 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 PCMTD1Q96MG8 357 aaPredicted RBP20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 KIF9Q9HAQ2 790 aa20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 TLR8Q9NR97 1041 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 WNT16Q9UBV4 365 aa20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 CCL26Q9Y258 94 aa20.91■□□□□ 0.94
PDLIM2-207ENST00000409417 F8VZ95 297 aa20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 EPHB6O15197 1021 aa20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 OLFM2O95897 454 aa20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 PNMA6AP0CW24 399 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 CLCN1P35523 988 aa20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 PGFP49763 221 aa20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 POLR2FP61218 127 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 HECTD3Q5T447 861 aa20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 ASIC4Q96FT7 647 aa20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 RNF38Q9H0F5 515 aa20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 TSPY26PQ9H489 355 aa20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 LRRC4Q9HBW1 653 aa20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 ARHGAP26Q9UNA1 814 aa20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 PATJQ8NI35 1801 aa20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 OBSL1O75147 1896 aa20.9■□□□□ 0.94
PDLIM2-207ENST00000409417 A0A1B0GTH6 734 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 TEX33O43247 280 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 ZBED1O96006 694 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 SERPINC1P01008 464 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 PSEN1P49768 467 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 TKTL1P51854 596 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 SLC7A9P82251 487 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 PFKPQ01813 784 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 PM20D1Q6GTS8 502 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 PMF1Q6P1K2 205 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 SLC47A2Q86VL8 602 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 NEK11Q8NG66 645 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 BPIFB1Q8TDL5 484 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 HSFY1Q96LI6 401 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 NAP1L5Q96NT1 182 aaPredicted RBP20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 BRD9Q9H8M2 597 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 C11orf16Q9NQ32 467 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 FBXL21Q9UKT6 434 aa20.89■□□□□ 0.94
PDLIM2-207ENST00000409417 ANAPC1Q9H1A4 1944 aa20.89■□□□□ 0.93
PDLIM2-207ENST00000409417 TMEM221A6NGB7 291 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 M0R296 226 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 COCHO43405 550 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 GPR37L1O60883 481 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 CFHP08603 1231 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 GPD2P43304 727 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 DENND1BQ6P3S1 775 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 YAF2Q8IY57 180 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 IRF7Q92985 503 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 CCSER2Q9H7U1 834 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 CYLDQ9NQC7 956 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 THG1LQ9NWX6 298 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 A0A1W2PQH9 124 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 ZNF263O14978 683 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 CHADO15335 359 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 GDI1P31150 447 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 JAM2P57087 298 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 ADIGQ0VDE8 80 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 SCD5Q86SK9 330 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 SIX6OS1Q8N1H7 587 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 ARHGAP18Q8N392 663 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 STK32AQ8WU08 396 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 NMUR1Q9HB89 426 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 NLRC4Q9NPP4 1024 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 TRPV5Q9NQA5 729 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 OSER1Q9NX31 292 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 CLIC5Q9NZA1 410 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 PCDHGC3Q9UN70 934 aa20.88■□□□□ 0.93
PDLIM2-207ENST00000409417 ZDBF2Q9HCK1 2354 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms