RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 MYO1HQ8N1T3 1032 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 DTX3Q8N9I9 347 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 JAKMIP2Q96AA8 810 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 IQCDQ96DY2 449 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 STAMBPL1Q96FJ0 436 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 MASTLQ96GX5 879 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 C8orf76Q96K31 380 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 RMDN2Q96LZ7 410 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 TMEM209Q96SK2 561 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 DIRC2Q96SL1 478 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 AMNQ9BXJ7 453 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 NSRP1Q9H0G5 558 aaKnown RBP5.85□□□□□ -1.47
CLK1-202ENST00000409403 SIL1Q9H173 461 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 VCX3BQ9H321 246 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 EPB41L4BQ9H329 900 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 NSUN3Q9H649 340 aaKnown RBP5.85□□□□□ -1.47
CLK1-202ENST00000409403 PCDH18Q9HCL0 1135 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 VCX3AQ9NNX9 186 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 DLL4Q9NR61 685 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 BABAM1Q9NWV8 329 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 BLOC1S6Q9UL45 172 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 WASF3Q9UPY6 502 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 INVSQ9Y283 1065 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 PCDHA5Q9Y5H7 936 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 EPG5Q9HCE0 2579 aa5.85□□□□□ -1.47
CLK1-202ENST00000409403 EDC4Q6P2E9 1401 aaKnown RBP5.84□□□□□ -1.47
CLK1-202ENST00000409403 WDFY4Q6ZS81 3184 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 A0A087WWV3 80 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 GCOM1H8Y6P7 765 aaPredicted RBP5.84□□□□□ -1.47
CLK1-202ENST00000409403 TRAPPC3O43617 180 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 RNF8O76064 485 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 MYZAPP0CAP1 466 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 HOXC9P31274 260 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 PBX1P40424 430 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 MC3RP41968 323 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 PAFAH1B1P43034 410 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 PSMC4P43686 418 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 ZNF131P52739 623 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 SRSF2Q01130 221 aaKnown RBP5.84□□□□□ -1.47
CLK1-202ENST00000409403 ODF1Q14990 250 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.84□□□□□ -1.47
CLK1-202ENST00000409403 PITRM1Q5JRX3 1037 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 FAM102BQ5T8I3 360 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 THEMIS2Q5TEJ8 643 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 NT5DC1Q5TFE4 455 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 AGBL2Q5U5Z8 902 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 SPATA1Q5VX52 437 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 RESP18Q5W5W9 173 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 NXNQ6DKJ4 435 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 PPP1R42Q7Z4L9 355 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 B3GNT8Q7Z7M8 397 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 FAM114A1Q8IWE2 563 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 FBXL16Q8N461 479 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 CCDC197Q8NCU1 140 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 RELTQ969Z4 430 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 EAF2Q96CJ1 260 aaPredicted RBP5.84□□□□□ -1.47
CLK1-202ENST00000409403 RAX2Q96IS3 184 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 GDAP1L1Q96MZ0 367 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 ASB2Q96Q27 587 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 FSD1Q9BTV5 496 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 CCDC28BQ9BUN5 200 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 BTBD2Q9BX70 525 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 AGXT2Q9BYV1 514 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 TRIM7Q9C029 511 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 QRSL1Q9H0R6 528 aaKnown RBP5.84□□□□□ -1.47
CLK1-202ENST00000409403 CNTD2Q9H8S5 307 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 DCP1AQ9NPI6 582 aaPredicted RBP5.84□□□□□ -1.47
CLK1-202ENST00000409403 ABHD10Q9NUJ1 306 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 MBD1Q9UIS9 605 aaPredicted RBP5.84□□□□□ -1.47
CLK1-202ENST00000409403 TMCO1Q9UM00 188 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 EDARQ9UNE0 448 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 ANKRD6Q9Y2G4 727 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 GIT1Q9Y2X7 761 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 NUMBLQ9Y6R0 609 aa5.84□□□□□ -1.47
CLK1-202ENST00000409403 MYOCOSA0A1B0GUC4 107 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 CCT8L1PA6NM43 557 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 PPIP5K2O43314 1243 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 TACC1O75410 805 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 NDUFA10O95299 355 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 PYGLP06737 847 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 MTHFD2P13995 350 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 MTNR1BP49286 362 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 NCKAP1LP55160 1127 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 BCAR1P56945 870 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 MRPS9P82933 396 aaKnown RBP5.83□□□□□ -1.48
CLK1-202ENST00000409403 DEUP1Q05D60 604 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 MTF1Q14872 753 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 ACCSLQ4AC99 568 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 TOR2AQ5JU69 321 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 UNQ6494/PRO21346Q6UXR6 183 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 CPLX4Q7Z7G2 160 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 TCEAL8Q8IYN2 117 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 CMTR2Q8IYT2 770 aaKnown RBP5.83□□□□□ -1.48
CLK1-202ENST00000409403 RTKN2Q8IZC4 609 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 WDR48Q8TAF3 677 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 TEKT4Q8WW24 435 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 DYDC1Q8WWB3 177 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 CCT6BQ92526 530 aa5.83□□□□□ -1.48
CLK1-202ENST00000409403 RPGRQ92834 1020 aaKnown RBP5.83□□□□□ -1.48
CLK1-202ENST00000409403 CENPTQ96BT3 561 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms