RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 FAM49BQ9NUQ9 324 aa6.57□□□□□ -1.36
GTF3C3-202ENST00000409364 RNF19AQ9NV58 838 aa6.57□□□□□ -1.36
GTF3C3-202ENST00000409364 GOLGA6AQ9NYA3 693 aa6.57□□□□□ -1.36
GTF3C3-202ENST00000409364 PCSK1NQ9UHG2 260 aa6.57□□□□□ -1.36
GTF3C3-202ENST00000409364 ANAPC5Q9UJX4 755 aa6.57□□□□□ -1.36
GTF3C3-202ENST00000409364 ZNF148Q9UQR1 794 aa6.57□□□□□ -1.36
GTF3C3-202ENST00000409364 R3HDM2Q9Y2K5 976 aaKnown RBP6.57□□□□□ -1.36
GTF3C3-202ENST00000409364 ATP8A1Q9Y2Q0 1164 aa6.57□□□□□ -1.36
GTF3C3-202ENST00000409364 ARHGEF37A1IGU5 675 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 C3orf70A6NLC5 250 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 HMGB1P1B2RPK0 211 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 H0YGN5 161 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 TULP2O00295 520 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 XPO1O14980 1071 aaKnown RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 PAPSS1O43252 624 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ENDOD1O94919 500 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 KRT14P02533 472 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ITGAVP06756 1048 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 GHRP10912 638 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 IVDP26440 423 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 IL1R2P27930 398 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ADORA2BP29275 332 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 RDXP35241 583 aaKnown RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 MLH1P40692 756 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 PTPN9P43378 593 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 VASPP50552 380 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 VCPP55072 806 aaKnown RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 IFFO1Q0D2I5 559 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 TFDP2Q14188 446 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 LPIN1Q14693 890 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 UAP1Q16222 522 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 CEP85LQ5SZL2 805 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ZNF618Q5T7W0 954 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 EMC10Q5UCC4 262 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 WSCD1Q658N2 575 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 DSTYKQ6XUX3 929 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 TRMT10CQ7L0Y3 403 aaKnown RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 SLC26A9Q7LBE3 791 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ANKS1BQ7Z6G8 1248 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 B3GALNT2Q8NCR0 500 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 CD99L2Q8TCZ2 262 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 SLC2A14Q8TDB8 520 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 TEKT4Q8WW24 435 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 KCTD13Q8WZ19 329 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 UROC1Q96N76 676 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ADAM2Q99965 735 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 DUSP16Q9BY84 665 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 DPEP3Q9H4B8 488 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 TMBIM4Q9HC24 238 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 AAASQ9NRG9 546 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 NEU2Q9Y3R4 380 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 NME7Q9Y5B8 376 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 NFS1Q9Y697 457 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ZNF487B1APH4 448 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 CST8O60676 142 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 EOMESO95936 686 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 NUDT17P0C025 328 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 CCDC130P13994 396 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 KLRC2P26717 231 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 PCSK1P29120 753 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 STIP1P31948 543 aaKnown RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 APLP1P51693 650 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 CLCNKBP51801 687 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 GYS2P54840 703 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 HTRA3P83110 453 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 CAP1Q01518 475 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ADCY2Q08462 1091 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 OASLQ15646 514 aaKnown RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 UPP1Q16831 310 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 TRIM71Q2Q1W2 868 aaKnown RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 KCNT1Q5JUK3 1230 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 C6orf118Q5T5N4 469 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 AGBL2Q5U5Z8 902 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 DENND2CQ68D51 928 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 SCYL2Q6P3W7 929 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 PCGF5Q86SE9 256 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 METTL23Q86XA0 190 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ALLCQ8N6M5 410 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ZSCAN1Q8NBB4 408 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 SLC43A3Q8NBI5 491 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 SLC35B2Q8TB61 432 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 CENPIQ92674 756 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ARL8AQ96BM9 186 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ZBTB9Q96C00 473 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ATP6V1G3Q96LB4 118 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 DDX23Q9BUQ8 820 aaKnown RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 TMEM109Q9BVC6 243 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 PRDM16Q9HAZ2 1276 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 IL21Q9HBE4 155 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 LRRC4Q9HBW1 653 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 HMX1Q9NP08 348 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 TRMT13Q9NUP7 481 aaKnown RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 KLHL11Q9NVR0 708 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 MIOSQ9NXC5 875 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 DSEQ9UL01 958 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 DNPEPQ9ULA0 475 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 CDH9Q9ULB4 789 aa6.56□□□□□ -1.36
GTF3C3-202ENST00000409364 ZSWIM8A7E2V4 1837 aa6.55□□□□□ -1.36
GTF3C3-202ENST00000409364 MEIS3P2A8K0S8 358 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms