RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 CDH7Q9ULB5 785 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 SYNPO2Q9UMS6 1093 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 FAF1Q9UNN5 650 aaPredicted RBP11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 hCG_2014768A0A024R1R8 64 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 PIK3CDO00329 1044 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 FBP2O00757 339 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 INHAP05111 366 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 CCL5P13501 91 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 COMTP21964 271 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 PHKA2P46019 1235 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 CCT8P50990 548 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 TUBA4AP68366 448 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 DLG1Q12959 904 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 CCNG2Q16589 344 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 CALCRLQ16602 461 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 KNOP1Q1ED39 458 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 SGO2Q562F6 1265 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 FAM47AQ5JRC9 791 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 C1orf146Q5VVC0 180 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 POTEHQ6S545 545 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 TMC7Q7Z402 723 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 METTL25Q8N6Q8 603 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 SLAIN1Q8ND83 568 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 RBM15BQ8NDT2 890 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 GLIS3Q8NEA6 775 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 RAB3IL1Q8TBN0 382 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 RASGRP4Q8TDF6 673 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 BHMTQ93088 406 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 TTC1Q99614 292 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 DHRS4Q9BTZ2 278 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 UNC93B1Q9H1C4 597 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 FBXO28Q9NVF7 368 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 IGSF9Q9P2J2 1179 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 BIN2Q9UBW5 565 aaPredicted RBP11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 RSL24D1Q9UHA3 163 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 ZNF180Q9UJW8 692 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 CNOT11Q9UKZ1 510 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 ZNF711Q9Y462 761 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 TTLL3Q9Y4R7 772 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 PPME1Q9Y570 386 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 GPC6Q9Y625 555 aaPredicted RBP11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 IGKV6D-41A0A0C4DH26 115 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 ALOX15BO15296 676 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 ITM2AO43736 263 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 FAM189A1O60320 539 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 FGFR1P11362 822 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 ZNF23P17027 643 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 AOC1P19801 751 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 ACAT1P24752 427 aaKnown RBP11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 PRDX6P30041 224 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 VCPP55072 806 aaKnown RBP11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 ZBTB17Q13105 803 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 IRF5Q13568 498 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 PTPROQ16827 1216 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 LETM2Q2VYF4 491 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 ZNF829Q3KNS6 432 aaPredicted RBP11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 IL23RQ5VWK5 629 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 NIPAL1Q6NVV3 410 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 LBX2Q6XYB7 198 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 GPR142Q7Z601 462 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 GDPD5Q8WTR4 605 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 TRIB2Q92519 343 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 CASP10Q92851 521 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 BORCS5Q969J3 196 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 ATG4CQ96DT6 458 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 C7orf26Q96N11 449 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 AGPAT1Q99943 283 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 INO80BQ9C086 356 aaPredicted RBP11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 STN1Q9H668 368 aaKnown RBP11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 KANSL2Q9H9L4 492 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 VPS45Q9NRW7 570 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 TBC1D23Q9NUY8 699 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 GCNT4Q9P109 453 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 TBK1Q9UHD2 729 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 SOX13Q9UN79 622 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 MAD1L1Q9Y6D9 718 aa11.07□□□□□ -0.64
NIF3L1-204ENST00000409357 FUOMA2VDF0 154 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 NMT2O60551 498 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 ESRRBO95718 433 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 BAG2O95816 211 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 CYP1A2P05177 515 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 KRT15P19012 456 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 CYP2B6P20813 491 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 BCAP31P51572 246 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 NOP14P78316 857 aaKnown RBP11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 CBLBQ13191 982 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 HIC1Q14526 733 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 DRAP1Q14919 205 aaPredicted RBP11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 TGFBIQ15582 683 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 CCL14Q16627 93 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 NLRX1Q86UT6 975 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 LZTR1Q8N653 840 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 BANPQ8N9N5 519 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 CEP70Q8NHQ1 597 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 SNX29Q8TEQ0 813 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 LPAR1Q92633 364 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 GPKOWQ92917 476 aaPredicted RBP eCLIP11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 HSPBAP1Q96EW2 488 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 ARPC5LQ9BPX5 153 aa11.06□□□□□ -0.64
NIF3L1-204ENST00000409357 DCLK3Q9C098 648 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms