RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 PPIDQ08752 370 aaKnown RBP12.53□□□□□ -0.4
SHANK2-203ENST00000409161 MZT2AQ6P582 158 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 TMEM26Q6ZUK4 368 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 EEPD1Q7L9B9 569 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 TTC30AQ86WT1 665 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 TMPRSS6Q8IU80 811 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 CCDC36Q8IYA8 594 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 C1orf232A0A0U1RR37 186 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 MGAT4DA6NG13 374 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 MROH9Q5TGP6 573 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 DDX53Q86TM3 631 aaKnown RBP12.53□□□□□ -0.4
SHANK2-203ENST00000409161 C10orf53Q8N6V4 93 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 APOL5Q9BWW9 433 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 C17orf75Q9HAS0 396 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 DKK3Q9UBP4 350 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 MROH7Q68CQ1 1323 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 CCDC182A6NF36 153 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 LARGE1O95461 756 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 FCER1AP12319 257 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 GTF2H1P32780 548 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 UBASH3BQ8TF42 649 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 CAVIN3Q969G5 261 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 ERGIC2Q96RQ1 377 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 PUS3Q9BZE2 481 aaKnown RBP12.53□□□□□ -0.4
SHANK2-203ENST00000409161 C8orf4Q9NR00 106 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 HAO1Q9UJM8 370 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 GSTK1Q9Y2Q3 226 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 ATP6V1G2O95670 118 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 MPOP05164 745 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 FEN1P39748 380 aaKnown RBP12.53□□□□□ -0.4
SHANK2-203ENST00000409161 GALNTL6Q49A17 601 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 ACTRT1Q8TDG2 376 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 SAR1AQ9NR31 198 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 MAPRE3Q9UPY8 281 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 V9GYQ6 96 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 NEO1Q92859 1461 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 AREL1O15033 823 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 MOCS2O96007 188 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-203ENST00000409161 CYP2D6P10635 497 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 LIN54Q6MZP7 749 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 TDRD5Q8NAT2 981 aaKnown RBP12.53□□□□□ -0.4
SHANK2-203ENST00000409161 CPA5Q8WXQ8 436 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 ASB2Q96Q27 587 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 PPP1R16BQ96T49 567 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 EPB41L4BQ9H329 900 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 ATP6V1C1P21283 382 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 PAICSP22234 425 aaKnown RBP12.53□□□□□ -0.4
SHANK2-203ENST00000409161 FCHO2Q0JRZ9 810 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 MB21D2Q8IYB1 491 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-203ENST00000409161 CACTIN-AS1Q8N1I8 211 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 AADATQ8N5Z0 425 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 FEZF2Q8TBJ5 459 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 FAM111AQ96PZ2 611 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 STN1Q9H668 368 aaKnown RBP12.53□□□□□ -0.4
SHANK2-203ENST00000409161 PIK3CDO00329 1044 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 TOP3AQ13472 1001 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-203ENST00000409161 SPDYCQ5MJ68 293 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 SHC4Q6S5L8 630 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 EPHX4Q8IUS5 362 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 HS6ST3Q8IZP7 471 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 RPS6KL1Q9Y6S9 549 aa12.53□□□□□ -0.4
SHANK2-203ENST00000409161 ASB14A6NK59 587 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 MYL12BO14950 172 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 EXTL3O43909 919 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 SLC34A1Q06495 639 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 ATP1A4Q13733 1029 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 EPHA7Q15375 998 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 ADSSL1Q8N142 457 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 ZNF669Q96BR6 464 aaPredicted RBP12.52□□□□□ -0.4
SHANK2-203ENST00000409161 CINPQ9BW66 212 aaPredicted RBP12.52□□□□□ -0.4
SHANK2-203ENST00000409161 DGKKQ5KSL6 1271 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 FNIP1Q8TF40 1166 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.4
SHANK2-203ENST00000409161 CRNNQ9UBG3 495 aaPredicted RBP12.52□□□□□ -0.4
SHANK2-203ENST00000409161 FRMPD1Q5SYB0 1578 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 USP6P35125 1406 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 ASMTLO95671 621 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 COMTP21964 271 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 SAMD4BQ5PRF9 694 aaKnown RBP12.52□□□□□ -0.4
SHANK2-203ENST00000409161 MAN1C1Q9NR34 630 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 AHSPQ9NZD4 102 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 SLC25A13Q9UJS0 675 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 ERVK-7P63135 1459 aa12.52□□□□□ -0.4
SHANK2-203ENST00000409161 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 HOXD10P28358 340 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 HK2P52789 917 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 RAB25P57735 213 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 SLC25A24Q6NUK1 477 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 SWSAP1Q6NVH7 229 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 USP17L6PQ6QN14 398 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 ADI1Q9BV57 179 aa12.52□□□□□ -0.41
SHANK2-203ENST00000409161 EMILIN2Q9BXX0 1053 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms