RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CENPTQ96BT3 561 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 TMA16Q96EY4 203 aaKnown RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 IDI2Q9BXS1 227 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 DEFB129Q9H1M3 183 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 R3HDMLQ9H3Y0 253 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 CAB39LQ9H9S4 337 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 IL1RL2Q9HB29 575 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 NDE1Q9NXR1 346 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 HERC5Q9UII4 1024 aaKnown RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 CNTNAP2Q9UHC6 1331 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 TCRBV9S1A1TA0A576 114 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 TBX10O75333 385 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 NFICP08651 508 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 TPBGLP0DKB5 382 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 UNGP13051 313 aaPredicted RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 ADRA2BP18089 450 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 CCR10P46092 362 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 COG7P83436 770 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 LMNB2Q03252 620 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 ASPHQ12797 758 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 ZNF268Q14587 947 aaPredicted RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 ANO4Q32M45 955 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 PAN2Q504Q3 1202 aaKnown RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 ANGEL2Q5VTE6 544 aaKnown RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 LRRC74BQ6ZQY2 392 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 UTS2BQ765I0 119 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 MON1BQ7L1V2 547 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 PPIL6Q8IXY8 311 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 AGGF1Q8N302 714 aaeCLIP8.67□□□□□ -1.02
SNX13-201ENST00000409076 FBXO41Q8TF61 875 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 CLEC4DQ8WXI8 215 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 OTUD5Q96G74 571 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 MBOAT7Q96N66 472 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 ATXN3LQ9H3M9 355 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 RPF1Q9H9Y2 349 aaKnown RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 CLUHO75153 1309 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 WDR27A2RRH5 827 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 AGRPO00253 132 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 CCDC22O60826 627 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 PROCP04070 461 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 TSPAN8P19075 237 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 PTPN4P29074 926 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 CASP2P42575 452 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 NFIL3Q16649 462 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 DUOXA2Q1HG44 320 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 TAS1R3Q7RTX0 852 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 PYROXD2Q8N2H3 581 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 EXD1Q8NHP7 514 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 CLEC4CQ8WTT0 213 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 CRYGNQ8WXF5 182 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 TRIM11Q96F44 468 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 GCNAQ96QF7 691 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 SYT11Q9BT88 431 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 A1CFQ9NQ94 594 aaKnown RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 ARHGEF3Q9NR81 526 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 PAPOLBQ9NRJ5 636 aaKnown RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 PNPOQ9NVS9 261 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 USP18Q9UMW8 372 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 hCG_1818297A0A087WSY0 165 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 A0A0B4J269 797 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 A6NJR5 290 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 C9JVG2 144 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 DCXO43602 365 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 ERVK-10P10266 1014 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 ACAT1P24752 427 aaKnown RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 HOXA10P31260 410 aaPredicted RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 SLC1A1P43005 524 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 DRG2P55039 364 aaKnown RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 ITGA9Q13797 1035 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 CA9Q16790 459 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 ARHGAP27Q6ZUM4 889 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 ALLCQ8N6M5 410 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 CNBD2Q96M20 576 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 CLIC5Q9NZA1 410 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 XPO1O14980 1071 aaKnown RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 ENTPD3O75355 529 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 CSPG5O95196 566 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 LUC7L3O95232 432 aaKnown RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 CALB1P05937 261 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 LINGO3P0C6S8 592 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 TFE3P19532 575 aaPredicted RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 TYK2P29597 1187 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 PLIN5Q00G26 463 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 POU5F1BQ06416 359 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 TMED1Q13445 227 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 CAPSQ13938 189 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 PDE1CQ14123 709 aaPredicted RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 PDCD2Q16342 344 aaPredicted RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 PDK4Q16654 411 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 ZACNQ401N2 412 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 RIPOR1Q6ZS17 1223 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 RBM15BQ8NDT2 890 aaKnown RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 CERKQ8TCT0 537 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 OXNAD1Q96HP4 312 aaPredicted RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 SIK2Q9H0K1 926 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 HACL1Q9UJ83 578 aa8.66□□□□□ -1.02
SNX13-201ENST00000409076 TRPC5Q9UL62 973 aaPredicted RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 TIMM13Q9Y5L4 95 aaPredicted RBP8.66□□□□□ -1.02
SNX13-201ENST00000409076 TNRC6CQ9HCJ0 1690 aaKnown RBP8.65□□□□□ -1.02
SNX13-201ENST00000409076 ADCY3O60266 1144 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms