RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 NCKAP1LP55160 1127 aa13.39□□□□□ -0.27
RNF43-201ENST00000407977 C21orf59P57076 290 aa13.39□□□□□ -0.27
RNF43-201ENST00000407977 PRKCEQ02156 737 aa13.39□□□□□ -0.27
RNF43-201ENST00000407977 MGAT5Q09328 741 aa13.39□□□□□ -0.27
RNF43-201ENST00000407977 ITGA9Q13797 1035 aa13.39□□□□□ -0.27
RNF43-201ENST00000407977 TRIM8Q9BZR9 551 aa13.39□□□□□ -0.27
RNF43-201ENST00000407977 CEP44Q9C0F1 390 aa13.39□□□□□ -0.27
RNF43-201ENST00000407977 RPAP3Q9H6T3 665 aaPredicted RBP13.39□□□□□ -0.27
RNF43-201ENST00000407977 JMJD4Q9H9V9 463 aa13.39□□□□□ -0.27
RNF43-201ENST00000407977 PIN4Q9Y237 131 aaKnown RBP13.39□□□□□ -0.27
RNF43-201ENST00000407977 ZNF862O60290 1169 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 GRAP2O75791 330 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 F9P00740 461 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 ADARP55265 1226 aaKnown RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 COG2Q14746 738 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 ATP6AP1LQ52LC2 224 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 TDRD5Q8NAT2 981 aaKnown RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 MRPL48Q96GC5 212 aaKnown RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 RNPEPL1Q9HAU8 725 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 SYTL2Q9HCH5 934 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 E2F8A0AVK6 867 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 UBDO15205 165 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 MLNP12872 115 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 ALADP13716 330 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 GARTP22102 1010 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 PPP3CCP48454 512 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 CLEC16AQ2KHT3 1053 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 FAM98BQ52LJ0 330 aaKnown RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 FAM45BPQ6NSW5 357 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 NUDT18Q6ZVK8 323 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 SLC25A41Q8N5S1 370 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 LRRC39Q96DD0 335 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 APOPT1Q96IL0 206 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 PRKAG2Q9UGJ0 569 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 PRR12Q9ULL5 1215 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 POLIQ9UNA4 740 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 TMEM191CA6NGB0 347 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 TBKBP1A7MCY6 615 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 VPS26AO75436 327 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 SGPL1O95470 568 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 ELF3P78545 371 aaPredicted RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 CNTN1Q12860 1018 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 IL31Q6EBC2 164 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 SGF29Q96ES7 293 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 ZFP42Q96MM3 310 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 PACSIN1Q9BY11 444 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 ETAA1Q9NY74 926 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 CYP39A1Q9NYL5 469 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 WWOXQ9NZC7 414 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 PRG3Q9Y2Y8 225 aaPredicted RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 DNALI1O14645 258 aaPredicted RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 PHGDHO43175 533 aaKnown RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 MMP10P09238 476 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 TXNP10599 105 aaKnown RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 NCALDP61601 193 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 TBX2Q13207 712 aaPredicted RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 NKX1-1Q15270 411 aaPredicted RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 INAQ16352 499 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 CYP51A1Q16850 503 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 DGUOKQ16854 277 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 TIGD7Q6NT04 549 aaPredicted RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.38□□□□□ -0.27
RNF43-201ENST00000407977 ZNF571Q7Z3V5 609 aaPredicted RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 HMG20AQ9NP66 347 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 KRT84Q9NSB2 600 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 UBAP1Q9NZ09 502 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 RNF112Q9ULX5 631 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 STARD13Q9Y3M8 1113 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 DAGLAQ9Y4D2 1042 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 DYTNA2CJ06 578 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 AHCYL1O43865 530 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 VDRP11473 427 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 PAX7P23759 505 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 TKTP29401 623 aaKnown RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 SOX11P35716 441 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 RXRGP48443 463 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 EIF2B2P49770 351 aaKnown RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 ARHGEF7Q14155 803 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 SLC45A4Q5BKX6 768 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 NT5DC1Q5TFE4 455 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 CYP4Z1Q86W10 505 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 DCP1BQ8IZD4 617 aaKnown RBP13.38□□□□□ -0.27
RNF43-201ENST00000407977 HPDLQ96IR7 371 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 VTA1Q9NP79 307 aa13.38□□□□□ -0.27
RNF43-201ENST00000407977 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.37□□□□□ -0.27
RNF43-201ENST00000407977 STX7O15400 261 aaKnown RBP13.37□□□□□ -0.27
RNF43-201ENST00000407977 CLOCKO15516 846 aa13.37□□□□□ -0.27
RNF43-201ENST00000407977 CDK7P50613 346 aa13.37□□□□□ -0.27
RNF43-201ENST00000407977 B3GNT6Q6ZMB0 384 aa13.37□□□□□ -0.27
RNF43-201ENST00000407977 C9orf16Q9BUW7 83 aa13.37□□□□□ -0.27
RNF43-201ENST00000407977 KCTD10Q9H3F6 313 aa13.37□□□□□ -0.27
RNF43-201ENST00000407977 E9PBE3 544 aa13.37□□□□□ -0.27
RNF43-201ENST00000407977 ATP6V1B2P21281 511 aa13.37□□□□□ -0.27
RNF43-201ENST00000407977 ME2P23368 584 aa13.37□□□□□ -0.27
RNF43-201ENST00000407977 FUT11Q495W5 492 aa13.37□□□□□ -0.27
RNF43-201ENST00000407977 TTC27Q6P3X3 843 aa13.37□□□□□ -0.27
RNF43-201ENST00000407977 OR8H2Q8N162 312 aa13.37□□□□□ -0.27
RNF43-201ENST00000407977 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.37□□□□□ -0.27
RNF43-201ENST00000407977 COQ7Q99807 217 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms