RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 OLFML1Q6UWY5 402 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 ATG14Q6ZNE5 492 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 C7orf31Q8N865 590 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 HSPH1Q92598 858 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 TMEM176AQ96HP8 235 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 GBA2Q9HCG7 927 aaPredicted RBP10.28□□□□□ -0.76
MSH2-202ENST00000406134 PNPLA8Q9NP80 782 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 NPHS2Q9NP85 383 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 UGT1A9O60656 530 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 GSRP00390 522 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 ARL4CP56559 192 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 NLRP9Q7RTR0 991 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 LRRC6Q86X45 466 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 CCDC125Q86Z20 511 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 C12orf29Q8N999 325 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 UBA3Q8TBC4 463 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 PYROXD1Q8WU10 500 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 CPB2Q96IY4 423 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 NLRP4Q96MN2 994 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 UGT1A7Q9HAW7 530 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 UGT1A10Q9HAW8 530 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 UGT1A8Q9HAW9 530 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 CEP83Q9Y592 693 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 GAS2O43903 313 aaKnown RBP10.28□□□□□ -0.76
MSH2-202ENST00000406134 GCLCP48506 637 aaPredicted RBP10.28□□□□□ -0.76
MSH2-202ENST00000406134 LACTBP83111 547 aaPredicted RBP10.28□□□□□ -0.76
MSH2-202ENST00000406134 FAAP100Q0VG06 881 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 SLC45A4Q5BKX6 768 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 MTDHQ86UE4 582 aaKnown RBP10.28□□□□□ -0.76
MSH2-202ENST00000406134 CHSY1Q86X52 802 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 IFNLR1Q8IU57 520 aaPredicted RBP10.28□□□□□ -0.76
MSH2-202ENST00000406134 ENDOVQ8N8Q3 282 aaKnown RBP10.28□□□□□ -0.76
MSH2-202ENST00000406134 TTC8Q8TAM2 541 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 SPATA18Q8TC71 538 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 FAF2Q96CS3 445 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 FAXDC2Q96IV6 333 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 LRRC37BQ96QE4 947 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 C20orf27Q9GZN8 174 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.28□□□□□ -0.76
MSH2-202ENST00000406134 RBPJLQ9UBG7 517 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 TM9SF1O15321 606 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 RPSAP08865 295 aaKnown RBP10.27□□□□□ -0.76
MSH2-202ENST00000406134 STAG3L1P0CL83 205 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 TPBGLP0DKB5 382 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 RBP3P10745 1247 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 TSHRP16473 764 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 CDC25CP30307 473 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 SLC10A2Q12908 348 aaPredicted RBP10.27□□□□□ -0.76
MSH2-202ENST00000406134 TRPC3Q13507 836 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 TEX44Q53QW1 395 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 SLC9A4Q6AI14 798 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 EFCAB12Q6NXP0 572 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 TTC30AQ86WT1 665 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 FAM167AQ96KS9 214 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 TCHPQ9BT92 498 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 DENND2DQ9H6A0 471 aaPredicted RBP10.27□□□□□ -0.76
MSH2-202ENST00000406134 ALG13Q9NP73 1137 aaKnown RBP10.27□□□□□ -0.76
MSH2-202ENST00000406134 AGTPBP1Q9UPW5 1226 aa10.27□□□□□ -0.76
MSH2-202ENST00000406134 TRIP12Q14669 1992 aaPredicted RBP10.27□□□□□ -0.77
MSH2-202ENST00000406134 MYO18AQ92614 2054 aaKnown RBP10.27□□□□□ -0.77
MSH2-202ENST00000406134 WDR91A4D1P6 747 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 PPEF2O14830 753 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 DIAPH2O60879 1101 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 IL1BP01584 269 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 SURF1Q15526 300 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 GJC2Q5T442 439 aaPredicted RBP10.27□□□□□ -0.77
MSH2-202ENST00000406134 PCDH19Q8TAB3 1148 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 LRRC8CQ8TDW0 803 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 ANKRD36BP1Q96IX9 119 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 LPIN3Q9BQK8 851 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 C2orf40Q9H1Z8 148 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 VPS11Q9H270 941 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 ARL8BQ9NVJ2 186 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 PPP2R3BQ9Y5P8 575 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 M0QYV0 167 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 RFPL1O75677 317 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 RDXP35241 583 aaKnown RBP10.27□□□□□ -0.77
MSH2-202ENST00000406134 PLCB3Q01970 1234 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 ACAP1Q15027 740 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 ANKRD20A2Q5SQ80 823 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 ZFYVE27Q5T4F4 411 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 ANKRD20A1Q5TYW2 823 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 ANKRD20A3Q5VUR7 823 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 TTC7BQ86TV6 843 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 NCAPG2Q86XI2 1143 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 RFX6Q8HWS3 928 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 MPP5Q8N3R9 675 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 TTC13Q8NBP0 860 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 KCTD6Q8NC69 237 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 RNF157Q96PX1 679 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 CADM1Q9BY67 442 aaKnown RBP10.27□□□□□ -0.77
MSH2-202ENST00000406134 FBXO6Q9NRD1 293 aaPredicted RBP10.27□□□□□ -0.77
MSH2-202ENST00000406134 TXLNGQ9NUQ3 528 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 MTMR10Q9NXD2 777 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 GTF2IRD1Q9UHL9 959 aa10.27□□□□□ -0.77
MSH2-202ENST00000406134 DPYSL4O14531 572 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 HCRTO43612 131 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 DNAJC6O75061 913 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 IL18RAPO95256 599 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 HMGCRP04035 888 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms