RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 CADM1Q9BY67 442 aaKnown RBP11.19□□□□□ -0.62
CLIP4-204ENST00000404424 IQCGQ9H095 443 aaKnown RBP11.19□□□□□ -0.62
CLIP4-204ENST00000404424 MMADHCQ9H3L0 296 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-204ENST00000404424 STOML1Q9UBI4 398 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 CORO1CQ9ULV4 474 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-204ENST00000404424 ZBTB42B2RXF5 422 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 H7C0C1 242 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 M0QYV0 167 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 COPEO14579 308 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 GSC2O15499 205 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 KRT37O76014 449 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 ITGBL1O95965 494 aaPredicted RBP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 SNRPAP09012 282 aaKnown RBP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 GSTA2P09210 222 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 PYGBP11216 843 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 ATP6V1C1P21283 382 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 ATP5OP48047 213 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 SERPINB4P48594 390 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 OSTNP61366 133 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 EN1Q05925 392 aaPredicted RBP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 TMEM132AQ24JP5 1023 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 TSNAXIP1Q2TAA8 658 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 CCDC62Q6P9F0 684 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 C4orf22Q6V702 233 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 LRRC71Q8N4P6 559 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 TTC17Q96AE7 1141 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 LRRC39Q96DD0 335 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 RNF157Q96PX1 679 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 SDCBP2Q9H190 292 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 C12orf65Q9H3J6 166 aaKnown RBP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 NUMBLQ9Y6R0 609 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 SOWAHBA6NEL2 793 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 C2CD4BA6NLJ0 364 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 INO80B-WBP1J3KQ70 363 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 GYG2O15488 501 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 PRPSAP2O60256 369 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 CXCL8P10145 99 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 ACADSP16219 412 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 TGM2P21980 687 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 SERPINB3P29508 390 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 PTDSS1P48651 473 aaKnown RBP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 SLC26A2P50443 739 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 TNFAIP2Q03169 654 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 BOLA3Q53S33 107 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 DALRD3Q5D0E6 543 aaKnown RBP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 ANGEL2Q5VTE6 544 aaKnown RBP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 ZC3H18Q86VM9 953 aaKnown RBP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 LMNTD2Q8IXW0 634 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 ARHGAP24Q8N264 748 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 TTC39CQ8N584 583 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 CEP120Q8N960 986 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 USP6NLQ92738 828 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 TWNKQ96RR1 684 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 PEBP4Q96S96 227 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 MPHOSPH6Q99547 160 aaKnown RBP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 GPR20Q99678 358 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 NFKBIZQ9BYH8 718 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 INO80BQ9C086 356 aaPredicted RBP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 ELOVL4Q9GZR5 314 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 CDT1Q9H211 546 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 USP29Q9HBJ7 922 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 ARL8BQ9NVJ2 186 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 MKS1Q9NXB0 559 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 KIAA1257Q9ULG3 409 aa11.18□□□□□ -0.62
CLIP4-204ENST00000404424 GOLGB1Q14789 3259 aaKnown RBP11.18□□□□□ -0.62
CLIP4-204ENST00000404424 BCLAF3A2AJT9 711 aaKnown RBP11.17□□□□□ -0.62
CLIP4-204ENST00000404424 ENTPD5O75356 428 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 PDGFRAP16234 1089 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 BGNP21810 368 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 PRKCHP24723 683 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 MAGEA6P43360 314 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 HIRAP54198 1017 aaPredicted RBP11.17□□□□□ -0.62
CLIP4-204ENST00000404424 CDK18Q07002 472 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 MMRN1Q13201 1228 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 MTM1Q13496 603 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 LY6KQ17RY6 165 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 EEF1DP3Q658K8 133 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 ATG16L1Q676U5 607 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 NPNTQ6UXI9 565 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 CYP4V2Q6ZWL3 525 aaPredicted RBP11.17□□□□□ -0.62
CLIP4-204ENST00000404424 TTC8Q8TAM2 541 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 MTBPQ96DY7 904 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 C7orf26Q96N11 449 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 SRPK1Q96SB4 655 aaKnown RBP11.17□□□□□ -0.62
CLIP4-204ENST00000404424 PDGFDQ9GZP0 370 aaPredicted RBP11.17□□□□□ -0.62
CLIP4-204ENST00000404424 KLC2Q9H0B6 622 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 ASB7Q9H672 318 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 SMYD3Q9H7B4 428 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 ALG13Q9NP73 1137 aaKnown RBP11.17□□□□□ -0.62
CLIP4-204ENST00000404424 RAB6BQ9NRW1 208 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 PRMT7Q9NVM4 692 aaPredicted RBP11.17□□□□□ -0.62
CLIP4-204ENST00000404424 KCNK4Q9NYG8 393 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 TRIM49D1C9J1S8 452 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 I3L4J1 428 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 NOP56O00567 594 aaKnown RBP11.17□□□□□ -0.62
CLIP4-204ENST00000404424 C1QAP02745 245 aa11.17□□□□□ -0.62
CLIP4-204ENST00000404424 ITGB3P05106 788 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms