RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 MAOBP27338 520 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 EIF2DP41214 584 aaKnown RBP12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 PNPLA4P41247 253 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MYL7Q01449 175 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 BNC1Q01954 994 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 HSF5Q4G112 596 aaPredicted RBP12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 EGFLAMQ63HQ2 1017 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SFR1Q86XK3 245 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TMEM86AQ8N2M4 240 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CSGALNACT2Q8N6G5 542 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TOP6BLQ8N6T0 577 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 LRRC52Q8N7C0 313 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TRIML1Q8N9V2 468 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CEP76Q8TAP6 659 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 POMGNT1Q8WZA1 660 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 RAD54LQ92698 747 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 LRIG1Q96JA1 1093 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 HSPA12BQ96MM6 686 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SYT15Q9BQS2 421 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MTMR12Q9C0I1 747 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CCDC86Q9H6F5 360 aaKnown RBP12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 IL21RQ9HBE5 538 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CACNA2D2Q9NY47 1150 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TRPM5Q9NZQ8 1165 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 F8VP50 259 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 AP5Z1O43299 807 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 TULP3O75386 442 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PRB1P04280 392 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PDGFRBP09619 1106 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PGFP49763 221 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CASP5P51878 434 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 ATXN3P54252 364 aaPredicted RBP12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 HMGN5P82970 282 aaKnown RBP12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 TAF10Q12962 218 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 SLFN12LQ6IEE8 588 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 DENND5BQ6ZUT9 1274 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 USP49Q70CQ1 688 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 TMEM25Q86YD3 366 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 NT5DC4Q86YG4 428 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 NAXDQ8IW45 347 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 FSIP1Q8NA03 581 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 FAM184AQ8NB25 1140 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 OR5B17Q8NGF7 314 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PCED1BQ96HM7 432 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CDK5RAP3Q96JB5 506 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 KIF2CQ99661 725 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PDE11AQ9HCR9 933 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 MAGEC2Q9UBF1 373 aaPredicted RBP12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CYP8B1Q9UNU6 501 aa12.7□□□□□ -0.38
SPTLC1P3-201ENST00000403408 GREM1O60565 184 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 DKK1O94907 266 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PFKLP17858 780 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 SCP2P22307 547 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 GRIK1P39086 918 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 LHX1P48742 406 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 GRIK2Q13002 908 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 VSTM1Q6UX27 236 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 TOGARAM2Q6ZUX3 1019 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 BBS7Q8IWZ6 715 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 ZNF513Q8N8E2 541 aaPredicted RBP12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 KIAA1958Q8N8K9 716 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 ZNF419Q96HQ0 510 aaPredicted RBP12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 MRPL45Q9BRJ2 306 aaKnown RBP12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CBWD1Q9BRT8 395 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 TBC1D7Q9P0N9 293 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PCOLCE2Q9UKZ9 415 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 RAD54BQ9Y620 910 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 SLCO1B1Q9Y6L6 691 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 SPTA1P02549 2419 aa12.69□□□□□ -0.38
SPTLC1P3-201ENST00000403408 A0A1W2PQD8 194 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 TBC1D3BA6NDS4 549 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PRRT4C9JH25 899 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 TULP1O00294 542 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CLDN5O00501 218 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 HOXC11O43248 304 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 COCHO43405 550 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 C1QL1O75973 258 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 ADH1CP00326 375 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 ABL1P00519 1130 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 KRT19P08727 400 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 HOXB2P14652 356 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PCSK1P29120 753 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 DPP6P42658 865 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 NOP14P78316 857 aaKnown RBP12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 RBP5P82980 135 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CAMK2BQ13554 666 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 BYSLQ13895 437 aaKnown RBP12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 RILPL1Q5EBL4 403 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 MDH1BQ5I0G3 518 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 ARL6IP4Q66PJ3 421 aaKnown RBP12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 SLC36A4Q6YBV0 504 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 GLRX5Q86SX6 157 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 TERB1Q8NA31 727 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 BAHD1Q8TBE0 780 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 IPO4Q8TEX9 1081 aaKnown RBP12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 C8orf48Q96LL4 319 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 ZNF518BQ9C0D4 1074 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 DPEP3Q9H4B8 488 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PCIF1Q9H4Z3 704 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms