RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 APOPT1Q96IL0 206 aa20.69■□□□□ 0.9
CCDC47-202ENST00000403162 MPHOSPH6Q99547 160 aaKnown RBP20.69■□□□□ 0.9
CCDC47-202ENST00000403162 C12orf65Q9H3J6 166 aaKnown RBP20.69■□□□□ 0.9
CCDC47-202ENST00000403162 XPO7Q9UIA9 1087 aaKnown RBP20.69■□□□□ 0.9
CCDC47-202ENST00000403162 SIGLEC16A6NMB1 481 aa20.69■□□□□ 0.9
CCDC47-202ENST00000403162 SPATA31C2B4DYI2 1134 aa20.69■□□□□ 0.9
CCDC47-202ENST00000403162 PIAS1O75925 651 aa20.69■□□□□ 0.9
CCDC47-202ENST00000403162 VHLP40337 213 aa20.69■□□□□ 0.9
CCDC47-202ENST00000403162 PSMC4P43686 418 aa20.69■□□□□ 0.9
CCDC47-202ENST00000403162 SLC18A2Q05940 514 aa20.69■□□□□ 0.9
CCDC47-202ENST00000403162 LRRC6Q86X45 466 aa20.69■□□□□ 0.9
CCDC47-202ENST00000403162 ARFGAP1Q8N6T3 406 aa20.69■□□□□ 0.9
CCDC47-202ENST00000403162 ZNF333Q96JL9 665 aa20.69■□□□□ 0.9
CCDC47-202ENST00000403162 KLF6Q99612 283 aaPredicted RBP20.69■□□□□ 0.9
CCDC47-202ENST00000403162 MMADHCQ9H3L0 296 aaPredicted RBP20.69■□□□□ 0.9
CCDC47-202ENST00000403162 C10orf88Q9H8K7 445 aa20.69■□□□□ 0.9
CCDC47-202ENST00000403162 ZWILCHQ9H900 591 aa20.69■□□□□ 0.9
CCDC47-202ENST00000403162 MAFBQ9Y5Q3 323 aaPredicted RBP20.69■□□□□ 0.9
CCDC47-202ENST00000403162 CFAP69A5D8W1 941 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 OATP04181 439 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 EDNRBP24530 442 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 IL1R2P27930 398 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 RFC1P35251 1148 aaPredicted RBP20.68■□□□□ 0.9
CCDC47-202ENST00000403162 GRB14Q14449 540 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 LBRQ14739 615 aaKnown RBP20.68■□□□□ 0.9
CCDC47-202ENST00000403162 SGSM1Q2NKQ1 1148 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 FAM91A1Q658Y4 838 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 DSTYKQ6XUX3 929 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 SH2D5Q6ZV89 423 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 DPP9Q86TI2 863 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 UNC45BQ8IWX7 931 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.68■□□□□ 0.9
CCDC47-202ENST00000403162 TFAP2BQ92481 460 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 TMEM120AQ9BXJ8 343 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 NVLO15381 856 aaKnown RBP20.68■□□□□ 0.9
CCDC47-202ENST00000403162 DLDP09622 509 aaKnown RBP20.68■□□□□ 0.9
CCDC47-202ENST00000403162 POLR2BP30876 1174 aaKnown RBP20.68■□□□□ 0.9
CCDC47-202ENST00000403162 MYL6P60660 151 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 PTK7Q13308 1070 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 MUM1Q2TAK8 710 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 SMTNL2Q2TAL5 461 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 ZNF792Q3KQV3 632 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 GNPTABQ3T906 1256 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 SEZ6Q53EL9 994 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 SLC44A1Q8WWI5 657 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 POLIQ9UNA4 740 aa20.68■□□□□ 0.9
CCDC47-202ENST00000403162 APOC4-APOC2K7ER74 178 aa20.67■□□□□ 0.9
CCDC47-202ENST00000403162 GYG2O15488 501 aa20.67■□□□□ 0.9
CCDC47-202ENST00000403162 FAM189A1O60320 539 aa20.67■□□□□ 0.9
CCDC47-202ENST00000403162 ATG7O95352 703 aa20.67■□□□□ 0.9
CCDC47-202ENST00000403162 APOC2P02655 101 aa20.67■□□□□ 0.9
CCDC47-202ENST00000403162 KRT3P12035 628 aa20.67■□□□□ 0.9
CCDC47-202ENST00000403162 SERPINB3P29508 390 aa20.67■□□□□ 0.9
CCDC47-202ENST00000403162 KLC1Q07866 573 aa20.67■□□□□ 0.9
CCDC47-202ENST00000403162 ZNF394Q53GI3 561 aa20.67■□□□□ 0.9
CCDC47-202ENST00000403162 NAIF1Q69YI7 327 aaPredicted RBP20.67■□□□□ 0.9
CCDC47-202ENST00000403162 APBB1IPQ7Z5R6 666 aaPredicted RBP20.67■□□□□ 0.9
CCDC47-202ENST00000403162 SLC7A3Q8WY07 619 aa20.67■□□□□ 0.9
CCDC47-202ENST00000403162 NMRK1Q9NWW6 199 aa20.67■□□□□ 0.9
CCDC47-202ENST00000403162 CNTN3Q9P232 1028 aa20.67■□□□□ 0.9
CCDC47-202ENST00000403162 DPPA5A6NC42 116 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 SLC15A5A6NIM6 579 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 PTPN20Q4JDL3 420 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 KCNT1Q5JUK3 1230 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 ZPBP2Q6X784 338 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 EEPD1Q7L9B9 569 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 SERAC1Q96JX3 654 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 MTMR12Q9C0I1 747 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 ALG13Q9NP73 1137 aaKnown RBP20.66■□□□□ 0.9
CCDC47-202ENST00000403162 ZNF302Q9NR11 478 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 CHMP2BQ9UQN3 213 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.66■□□□□ 0.9
CCDC47-202ENST00000403162 KLF11O14901 512 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 SPAG6O75602 509 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 HARSP12081 509 aaKnown RBP20.66■□□□□ 0.9
CCDC47-202ENST00000403162 ZNF200P98182 395 aaPredicted RBP20.66■□□□□ 0.9
CCDC47-202ENST00000403162 OCRLQ01968 901 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 ZBTB16Q05516 673 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 CBLBQ13191 982 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 DPYSL3Q14195 570 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 JOSD2Q8TAC2 188 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 FAM136AQ96C01 138 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 NIFKQ9BYG3 293 aaKnown RBP20.66■□□□□ 0.9
CCDC47-202ENST00000403162 LHX5Q9H2C1 402 aa20.66■□□□□ 0.9
CCDC47-202ENST00000403162 TCRBV9S1A1TA0A576 114 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 TNFSF9P41273 254 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 EIF3EP60228 445 aaKnown RBP20.65■□□□□ 0.9
CCDC47-202ENST00000403162 YWHAEP62258 255 aaKnown RBP20.65■□□□□ 0.9
CCDC47-202ENST00000403162 RCN1Q15293 331 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 CCDC6Q16204 474 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 ACSBG2Q5FVE4 666 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 DENND1BQ6P3S1 775 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 CCDC62Q6P9F0 684 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 IGDCC3Q8IVU1 814 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 KIAA0319LQ8IZA0 1049 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 FAM71DQ8N9W8 422 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 ZNF483Q8TF39 744 aaPredicted RBP20.65■□□□□ 0.9
CCDC47-202ENST00000403162 FAM111AQ96PZ2 611 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 FBXO6Q9NRD1 293 aaPredicted RBP20.65■□□□□ 0.9
CCDC47-202ENST00000403162 TEX264Q9Y6I9 313 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms