RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 TRADDQ15628 312 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 CA9Q16790 459 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 ZNF697Q5TEC3 545 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 LIN9Q5TKA1 542 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 PLPP4Q5VZY2 271 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 CC2D1AQ6P1N0 951 aaPredicted RBP12.28□□□□□ -0.44
SKA3-203ENST00000400018 HERC6Q8IVU3 1022 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 HDAC7Q8WUI4 952 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 LBHD1Q9BQE6 289 aaPredicted RBP12.28□□□□□ -0.44
SKA3-203ENST00000400018 ACBD6Q9BR61 282 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 LRRC4Q9HBW1 653 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 ANLNQ9NQW6 1124 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 PARVAQ9NVD7 372 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 OSER1Q9NX31 292 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 SFMBT1Q9UHJ3 866 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 AMFRQ9UKV5 643 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 CDH9Q9ULB4 789 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 FGF18O76093 207 aa12.27□□□□□ -0.44
SKA3-203ENST00000400018 CDH5P33151 784 aaPredicted RBP12.27□□□□□ -0.44
SKA3-203ENST00000400018 NRLP54845 237 aa12.27□□□□□ -0.44
SKA3-203ENST00000400018 ROR1Q01973 937 aa12.27□□□□□ -0.44
SKA3-203ENST00000400018 C1QBPQ07021 282 aaKnown RBP12.27□□□□□ -0.44
SKA3-203ENST00000400018 ZC3H12AQ5D1E8 599 aaKnown RBP12.27□□□□□ -0.44
SKA3-203ENST00000400018 PPP1R15BQ5SWA1 713 aa12.27□□□□□ -0.44
SKA3-203ENST00000400018 C10orf76Q5T2E6 689 aa12.27□□□□□ -0.44
SKA3-203ENST00000400018 FAM171BQ6P995 826 aa12.27□□□□□ -0.44
SKA3-203ENST00000400018 FAM131BQ86XD5 332 aa12.27□□□□□ -0.44
SKA3-203ENST00000400018 KLHL7Q8IXQ5 586 aa12.27□□□□□ -0.44
SKA3-203ENST00000400018 DEFB106AQ8N104 65 aa12.27□□□□□ -0.44
SKA3-203ENST00000400018 ATG4AQ8WYN0 398 aa12.27□□□□□ -0.44
SKA3-203ENST00000400018 RAPGEF5Q92565 580 aa12.27□□□□□ -0.44
SKA3-203ENST00000400018 NMUR1Q9HB89 426 aa12.27□□□□□ -0.44
SKA3-203ENST00000400018 ABCB6Q9NP58 842 aa12.27□□□□□ -0.44
SKA3-203ENST00000400018 CYP11A1P05108 521 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 FYNP06241 537 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 PCSK1P29120 753 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 SLC5A3P53794 718 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 TSPY1Q01534 308 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 PPIGQ13427 754 aaKnown RBP eCLIP12.27□□□□□ -0.45
SKA3-203ENST00000400018 PSMD5Q16401 504 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 CCDC14Q49A88 953 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 ARHGAP17Q68EM7 881 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 THEM5Q8N1Q8 247 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 TAB3Q8N5C8 712 aaPredicted RBP12.27□□□□□ -0.45
SKA3-203ENST00000400018 C3orf20Q8ND61 904 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 ZNF558Q96NG5 402 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 SLC4A5Q9BY07 1137 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 SEZ6LQ9BYH1 1024 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 MYO15AQ9UKN7 3530 aa12.27□□□□□ -0.45
SKA3-203ENST00000400018 ZNF638Q14966 1978 aaKnown RBP12.27□□□□□ -0.45
SKA3-203ENST00000400018 MTMR11A4FU01 709 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 LRCH4O75427 683 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 LSM8O95777 96 aaKnown RBP12.26□□□□□ -0.45
SKA3-203ENST00000400018 GJA1P17302 382 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 FGFR3P22607 806 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 CTNNB1P35222 781 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 SNX1Q13596 522 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 ELF2Q15723 593 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 TRIM72Q6ZMU5 477 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 CCDC50Q8IVM0 306 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 RHOT2Q8IXI1 618 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 SLC39A11Q8N1S5 342 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 TMEM86AQ8N2M4 240 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 RNF10Q8N5U6 811 aaKnown RBP12.26□□□□□ -0.45
SKA3-203ENST00000400018 UROC1Q96N76 676 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 RBM12Q9NTZ6 932 aaKnown RBP12.26□□□□□ -0.45
SKA3-203ENST00000400018 YBX2Q9Y2T7 364 aaKnown RBP12.26□□□□□ -0.45
SKA3-203ENST00000400018 MFHAS1Q9Y4C4 1052 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 BRWD1Q9NSI6 2320 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 I6L893 689 aaPredicted RBP12.26□□□□□ -0.45
SKA3-203ENST00000400018 FGGP02679 453 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 CALB1P05937 261 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 HMBSP08397 361 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 PAPD7Q5XG87 772 aaKnown RBP12.26□□□□□ -0.45
SKA3-203ENST00000400018 SLFN11Q7Z7L1 901 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 GSPT2Q8IYD1 628 aaKnown RBP12.26□□□□□ -0.45
SKA3-203ENST00000400018 TNS4Q8IZW8 715 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 SIX6OS1Q8N1H7 587 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 MICAL1Q8TDZ2 1067 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 RNPC3Q96LT9 517 aaKnown RBP12.26□□□□□ -0.45
SKA3-203ENST00000400018 TBCBQ99426 244 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 APOL5Q9BWW9 433 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 CDC23Q9UJX2 597 aa12.26□□□□□ -0.45
SKA3-203ENST00000400018 LTBP2Q14767 1821 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 OAZ2O95190 189 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 NCAM1P13591 858 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 MIPP30301 263 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 KCNJ1P48048 391 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 GTF2A1P52655 376 aaPredicted RBP12.25□□□□□ -0.45
SKA3-203ENST00000400018 GYS2P54840 703 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 SLC6A3Q01959 620 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 ZNF662Q6ZS27 426 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 TMC7Q7Z402 723 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 TMEM110Q86TL2 294 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 FIBCD1Q8N539 461 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 CCDC185Q8N715 623 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 FAM172AQ8WUF8 416 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 MCRS1Q96EZ8 462 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 SMARCD1Q96GM5 515 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 HES6Q96HZ4 224 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms