RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 MARK2Q7KZI7 788 aaKnown RBP14.22□□□□□ -0.13
VAPA-202ENST00000400000 GATAD2AQ86YP4 633 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 SNRNP27Q8WVK2 155 aaKnown RBP14.22□□□□□ -0.13
VAPA-202ENST00000400000 CBWD1Q9BRT8 395 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 MIR1-1HGQ9H1L0 117 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 PLA2G4CQ9UP65 541 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 ZBTB22O15209 634 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 ARID3BQ8IVW6 561 aaPredicted RBP14.21□□□□□ -0.13
VAPA-202ENST00000400000 STAMBPL1Q96FJ0 436 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 CCT7Q99832 543 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 ADARB2Q9NS39 739 aaKnown RBP14.21□□□□□ -0.13
VAPA-202ENST00000400000 GPRC5DQ9NZD1 345 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 WDR35Q9P2L0 1181 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 FDX1P10109 184 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 ATP12AP54707 1039 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 EPHB3P54753 998 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 BBS7Q8IWZ6 715 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 RSAD1Q9HA92 442 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 BOP1Q14137 746 aaKnown RBP14.21□□□□□ -0.13
VAPA-202ENST00000400000 NFIL3Q16649 462 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 RAD9BQ6WBX8 426 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 RNF208Q9H0X6 261 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 SOAT2O75908 522 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 CALCAP01258 141 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 ZNF23P17027 643 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 ITIH2P19823 946 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 NAB2Q15742 525 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 E4F1Q66K89 784 aaPredicted RBP14.21□□□□□ -0.13
VAPA-202ENST00000400000 TMED8Q6PL24 325 aaPredicted RBP14.21□□□□□ -0.13
VAPA-202ENST00000400000 MICU2Q8IYU8 434 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 RSPH1Q8WYR4 309 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 ZIM3Q96PE6 472 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 INTS13Q9NVM9 706 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 SH3BP4Q9P0V3 963 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 PCDHB2Q9Y5E7 798 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 PNPLA7Q6ZV29 1317 aa14.21□□□□□ -0.13
VAPA-202ENST00000400000 CHUKO15111 745 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 STIP1P31948 543 aaKnown RBP14.21□□□□□ -0.14
VAPA-202ENST00000400000 SLFN11Q7Z7L1 901 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 CHST13Q8NET6 341 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 UVRAGQ9P2Y5 699 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 ZDHHC9Q9Y397 364 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 TRDMT1O14717 391 aaKnown RBP14.21□□□□□ -0.14
VAPA-202ENST00000400000 YWHAQP27348 245 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 SERPINB10P48595 397 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 PLD1Q13393 1074 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 TRIM25Q14258 630 aaKnown RBP14.21□□□□□ -0.14
VAPA-202ENST00000400000 UGP2Q16851 508 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 ZNF284Q2VY69 593 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 DENND1BQ6P3S1 775 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 ZNF438Q7Z4V0 828 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 KRT77Q7Z794 578 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 FBXO36Q8NEA4 188 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.21□□□□□ -0.14
VAPA-202ENST00000400000 DYRK1BQ9Y463 629 aa14.21□□□□□ -0.14
VAPA-202ENST00000400000 MGAT4DA6NG13 374 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 KLHL41O60662 606 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 THP07101 528 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 COILP38432 576 aaPredicted RBP14.2□□□□□ -0.14
VAPA-202ENST00000400000 CDC42EP1Q00587 391 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 BTG3Q14201 252 aaPredicted RBP14.2□□□□□ -0.14
VAPA-202ENST00000400000 FAM83EQ2M2I3 478 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 CALML6Q8TD86 181 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 EPN3Q9H201 632 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 GID8Q9NWU2 228 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 EIF3LQ9Y262 564 aaKnown RBP14.2□□□□□ -0.14
VAPA-202ENST00000400000 USP15Q9Y4E8 981 aaPredicted RBP14.2□□□□□ -0.14
VAPA-202ENST00000400000 CNTNAP5Q8WYK1 1306 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 FOXN3O00409 490 aaPredicted RBP14.2□□□□□ -0.14
VAPA-202ENST00000400000 DLGAP3O95886 979 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 SERPINB3P29508 390 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 RUNX1T1Q06455 604 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 RALGDSQ12967 914 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 USP39Q53GS9 565 aaKnown RBP14.2□□□□□ -0.14
VAPA-202ENST00000400000 FAM171A1Q5VUB5 890 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 ACAD10Q6JQN1 1059 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 CCT8L2Q96SF2 557 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 KCNQ5Q9NR82 932 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 DDX43Q9NXZ2 648 aaKnown RBP14.2□□□□□ -0.14
VAPA-202ENST00000400000 IQCMA0A1B0GVH7 501 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 PDZK1P1A8MUH7 402 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 H7C4K7 107 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 JCHAINP01591 159 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 EXOSC10Q01780 885 aaKnown RBP14.2□□□□□ -0.14
VAPA-202ENST00000400000 BMPR2Q13873 1038 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 FNDC3BQ53EP0 1204 aaKnown RBP14.2□□□□□ -0.14
VAPA-202ENST00000400000 NAPEPLDQ6IQ20 393 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 STRA8Q7Z7C7 330 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 SGMS1Q86VZ5 419 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 RIC8BQ9NVN3 520 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 SCN3BQ9NY72 215 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 USP1O94782 785 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 NTSR2O95665 410 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 STILQ15468 1287 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 KLHDC7AQ5VTJ3 777 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 STYK1Q6J9G0 422 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 PPIL6Q8IXY8 311 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 CALR3Q96L12 384 aaKnown RBP14.2□□□□□ -0.14
VAPA-202ENST00000400000 ENTPD3O75355 529 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 FAM86B2P0C5J1 330 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms