RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 NCOA4Q13772 614 aa18.06■□□□□ 0.48
EWSR1-206ENST00000397938 LRRC23Q53EV4 343 aaPredicted RBP18.06■□□□□ 0.48
EWSR1-206ENST00000397938 CRLF3Q8IUI8 442 aa18.06■□□□□ 0.48
EWSR1-206ENST00000397938 WDTC1Q8N5D0 677 aa18.06■□□□□ 0.48
EWSR1-206ENST00000397938 FAM81AQ8TBF8 368 aa18.06■□□□□ 0.48
EWSR1-206ENST00000397938 ZNF518BQ9C0D4 1074 aa18.06■□□□□ 0.48
EWSR1-206ENST00000397938 POLR3FQ9H1D9 316 aaPredicted RBP18.06■□□□□ 0.48
EWSR1-206ENST00000397938 MKS1Q9NXB0 559 aa18.06■□□□□ 0.48
EWSR1-206ENST00000397938 GABBR1Q9UBS5 961 aa18.06■□□□□ 0.48
EWSR1-206ENST00000397938 SLC9A2Q9UBY0 812 aa18.06■□□□□ 0.48
EWSR1-206ENST00000397938 ZNF180Q9UJW8 692 aa18.06■□□□□ 0.48
EWSR1-206ENST00000397938 SOX13Q9UN79 622 aa18.06■□□□□ 0.48
EWSR1-206ENST00000397938 PCDHA10Q9Y5I2 948 aa18.06■□□□□ 0.48
EWSR1-206ENST00000397938 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.05■□□□□ 0.48
EWSR1-206ENST00000397938 APOC4-APOC2K7ER74 178 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 MCF2LO15068 1137 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 STAM2O75886 525 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 APOC2P02655 101 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 CD48P09326 243 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 KITP10721 976 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 ABCD1P33897 745 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 MAP3K10Q02779 954 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 KCNJ11Q14654 390 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 CFAP157Q5JU67 520 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 ZBTB41Q5SVQ8 909 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 GPAT2Q6NUI2 795 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 RASSF3Q86WH2 238 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 PPM1NQ8N819 430 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 GSTCDQ8NEC7 633 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 RAB3IL1Q8TBN0 382 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 GLIS2Q9BZE0 524 aaPredicted RBP18.05■□□□□ 0.48
EWSR1-206ENST00000397938 COL11A2P13942 1736 aaPredicted RBP18.05■□□□□ 0.48
EWSR1-206ENST00000397938 MEI4A8MW99 385 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 SNNO75324 88 aaPredicted RBP18.05■□□□□ 0.48
EWSR1-206ENST00000397938 RBP3P10745 1247 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 CDH5P33151 784 aaPredicted RBP18.05■□□□□ 0.48
EWSR1-206ENST00000397938 RFC1P35251 1148 aaPredicted RBP18.05■□□□□ 0.48
EWSR1-206ENST00000397938 UBAP2LQ14157 1087 aaKnown RBP18.05■□□□□ 0.48
EWSR1-206ENST00000397938 HADHQ16836 314 aaKnown RBP18.05■□□□□ 0.48
EWSR1-206ENST00000397938 EFHC1Q5JVL4 640 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 NUDCD3Q8IVD9 361 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 STKLD1Q8NE28 680 aa18.05■□□□□ 0.48
EWSR1-206ENST00000397938 TCP10L2B9ZVM9 353 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 RFPL1O75677 317 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 AOC1P19801 751 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 PDE1BQ01064 536 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 HIC1Q14526 733 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 SCARA3Q6AZY7 606 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 RFX6Q8HWS3 928 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 CTAGE3PQ8IX95 158 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 SHKBP1Q8TBC3 707 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 CFAP36Q96G28 342 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 RILPQ96NA2 401 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 IRAK4Q9NWZ3 460 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 CYB561D2O14569 222 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 ETS2P15036 469 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 WASHC5Q12768 1159 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 GRM2Q14416 872 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 SFT2D3Q587I9 215 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 SDCCAG8Q86SQ7 713 aaPredicted RBP18.04■□□□□ 0.48
EWSR1-206ENST00000397938 NME8Q8N427 588 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 ATP6V0A1Q93050 837 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 ZBTB45Q96K62 511 aaPredicted RBP18.04■□□□□ 0.48
EWSR1-206ENST00000397938 OCEL1Q9H607 264 aa18.04■□□□□ 0.48
EWSR1-206ENST00000397938 CNTNAP2Q9UHC6 1331 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 TESPA1A2RU30 521 aaPredicted RBP18.03■□□□□ 0.48
EWSR1-206ENST00000397938 SDR42E2A6NKP2 422 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 HARSP12081 509 aaKnown RBP18.03■□□□□ 0.48
EWSR1-206ENST00000397938 SH3BGRP55822 239 aaPredicted RBP18.03■□□□□ 0.48
EWSR1-206ENST00000397938 RPS6P62753 249 aaKnown RBP18.03■□□□□ 0.48
EWSR1-206ENST00000397938 ASPHQ12797 758 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 CBLBQ13191 982 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 MED21Q13503 144 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 RNF111Q6ZNA4 994 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 JOSD2Q8TAC2 188 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 NAT14Q8WUY8 206 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 APBB2Q92870 758 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 IMPG2Q9BZV3 1241 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 C20orf27Q9GZN8 174 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 HOMER2Q9NSB8 354 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 SORCS3Q9UPU3 1222 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 CXorf49A8MYA2 514 aaPredicted RBP18.03■□□□□ 0.48
EWSR1-206ENST00000397938 CREB3O43889 395 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 AVILO75366 819 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 UQCRBP14927 111 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 EIF4BP23588 611 aaKnown RBP18.03■□□□□ 0.48
EWSR1-206ENST00000397938 GRIA2P42262 883 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 MSLNQ13421 630 aaPredicted RBP18.03■□□□□ 0.48
EWSR1-206ENST00000397938 PABPC1LQ4VXU2 614 aaKnown RBP18.03■□□□□ 0.48
EWSR1-206ENST00000397938 KIAA0319LQ8IZA0 1049 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 CPXCR1Q8N123 301 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 PYDC1Q8WXC3 89 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 C8orf37Q96NL8 207 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 EBF4Q9BQW3 602 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 PDCD2LQ9BRP1 358 aa18.03■□□□□ 0.48
EWSR1-206ENST00000397938 SEPT9Q9UHD8 586 aaPredicted RBP18.03■□□□□ 0.48
EWSR1-206ENST00000397938 A0A0B4J269 797 aa18.02■□□□□ 0.48
EWSR1-206ENST00000397938 CHADO15335 359 aa18.02■□□□□ 0.48
EWSR1-206ENST00000397938 OPHN1O60890 802 aa18.02■□□□□ 0.48
EWSR1-206ENST00000397938 PYGLP06737 847 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms